Gene Information

Name : W5S_1255 (W5S_1255)
Accession : YP_006282228.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1378770 - 1379936 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATAGCCATTAGCGGAACGGGATATGTGGGTTTATCGAATGGATTATTATTAGCACAACGGCATCAGGTTGTGGC
GTTGGATATTGTGGCTGAAAAAGTGGCGCTGTTAAATCAACGAAAATCGCCGATTAATGACGCAGAAATTGAGCGTTTTT
TACAACATGAAACGCTGGATTTCTCGGCTACGCTGGATAAGCATGAGGCGTATATCGATGCGCAGTTCGTGATTATCGCT
ACGCCGACTGATTACGATCCGCAAACCAACTATTTCAATACCTCGTCGGTAGAGGCGGTCATTCGCGATGTGTTGGCGAT
TAACCCACAGGCCATTATGGTGATTAAATCGACGGTGCCTGTTGGCTTTACGGAGAAAATCAGCCAACAGTTGGATACGG
ATCACATCATTTTTTCGCCCGAGTTTTTACGCGAAGGAAAGGCGCTGCATGACAATCTTTATCCGTCACGAATTGTGGTG
GGTGAACGCTCGGAAAGGGCAAGGTTCTTCGCTAACCTATTGATGGAATGCGCATTAAAGAAAGATGTTCGTGTGCTATT
TACCGATCCGACAGAGGCCGAAGCGATAAAGTTATTTGCGAATACCTTTCTGGCAATGCGGGTGGCCTACTTTAATGAAT
TGGACAGTTATGCCGAGTCGCTGGGGTTGAATACCCGGCAGATTATCGAAGGCGTGTGTCTCGATCCTCGCATCGGCGAT
TACTACAACAACCCTTCTTTTGGCTACGGCGGTTACTGTTTACCGAAAGATACCCGGCAGCTTCTGGCTAACTATCGTAC
CGTACCGAATAATCTGATCAAGGCTATCGTAGAGGCTAACCATACGCGGAAAGACTTCATTGCCGACACAATTATCCGTC
GCCACCCTAAAACCGTTGGCGTCTATCGCCTTATCATGAAAGCGGGGTCGGACAATTTTCGCTTTTCCTCCATTCAGGGC
ATTATGAAAAGGATAAAAGCGAAAGGAATCAATGTTGTGATTTATGAACCGGGCATTGATGATGACGATTTTCTGGATTT
TCCTATCATTCATCAATTCGACAGTTTCAAACAACAGTGTGACATTATTATTACCAATCGTTATGTCGATGAATTAAAAG
ATGTGATGGGGAAAGTCTATACGCGAGATTTATTTGGCGAAGATTGA

Protein sequence : 
MKIAISGTGYVGLSNGLLLAQRHQVVALDIVAEKVALLNQRKSPINDAEIERFLQHETLDFSATLDKHEAYIDAQFVIIA
TPTDYDPQTNYFNTSSVEAVIRDVLAINPQAIMVIKSTVPVGFTEKISQQLDTDHIIFSPEFLREGKALHDNLYPSRIVV
GERSERARFFANLLMECALKKDVRVLFTDPTEAEAIKLFANTFLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGD
YYNNPSFGYGGYCLPKDTRQLLANYRTVPNNLIKAIVEANHTRKDFIADTIIRRHPKTVGVYRLIMKAGSDNFRFSSIQG
IMKRIKAKGINVVIYEPGIDDDDFLDFPIIHQFDSFKQQCDIIITNRYVDELKDVMGKVYTRDLFGED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-89 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_1255 YP_006282228.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 3e-96 54