Gene Information

Name : W5S_1149 (W5S_1149)
Accession : YP_006282122.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : ABC transporter permease (FecCD_family)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1259171 - 1260253 bp
Length : 1083 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACAACCACTGAACCGGGTATCCGTAATACTGCCACGGATGCCAACACCATTATGGACAACTATCGCGGTATTAT
TCGACGCCGTGTGGGTGTTATGGCGATACTGCTGTTGATCATCATCGGCTCGTTGTTGCTGGATTTCACGATGGGGCCTT
CGGGGCTAACGCTTGATGTGCTCTGGAACACGCTGACCGATCCAGCCAGCGCCGATGCAGGCACACGCGTGATCGTCTGG
GATATTCGTCTGCCCTATGCGCTGATGGCTATCATCGTCGGGCTAGCGCTCGGCCTGGCTGGCGCAGAAATGCAGACGAT
CCTGAACAACCCGTTGGCCAGCCCGTTTACGCTTGGCGTTTCCTCCGCCGCCGCATTCGGCGCGGCGTTGGCTATCGTGC
TAGGCATCGGTATCCCCGGCATTCCGGCTCAGTGGTTTATTTCTGCAAACGCCTTTATCTTTGCTCTGCTGGCAGCGTTG
CTGCTTGATGGCATTACGCGCTGGACGCAGGTCGCCACCTCCGGCGTGGTGCTGTTCGGTATCGCGTTGGTGTTCACTTT
CAATGCGCTGGTTTCCATGCTCCAGTTCATCGCTAACGAAGACACGTTGCAAGGTCTAGTGTTCTGGACCATGGGCAGTC
TGGCTCGCGCCTCGTGGGAAAAGCTGGGCATCCTGCTGCTGGTACTGGTCATCGTTATGCCCATTTCGCTAATGAGTTCG
TGGAAATTGACTGCACTGCGGTTGGGTGAAGATCGTGCTGTCAGCTTCGGTATTAACGTGCGCCGCTTGCGTCTGGCAAC
GCTGCTGCGTATTAGTATTTTATCCGCTATTTCAGTCGCGTTTGTTGGCCCCATCGGCTTTATCGGTCTGGTTGCTCCGC
ATATCGCACGTATGATTTTCGGTGAAGATCACCGTTTCTATTTGCCTGCCAGTGCATTAACGGGTGCGCTGGTGCTATCG
ATGGCGTCTGTTGCCTCGAAAAACCTGATTCCCGGCGTCATTATTCCGGTCGGTATCGTCACCTCACTGGTTGGCGTACC
TTTCTTCCTGAGTATTATTTTGCGCCACAGAGGGAACGTATGA

Protein sequence :
MSTTTEPGIRNTATDANTIMDNYRGIIRRRVGVMAILLLIIIGSLLLDFTMGPSGLTLDVLWNTLTDPASADAGTRVIVW
DIRLPYALMAIIVGLALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLGIGIPGIPAQWFISANAFIFALLAAL
LLDGITRWTQVATSGVVLFGIALVFTFNALVSMLQFIANEDTLQGLVFWTMGSLARASWEKLGILLLVLVIVMPISLMSS
WKLTALRLGEDRAVSFGINVRRLRLATLLRISILSAISVAFVGPIGFIGLVAPHIARMIFGEDHRFYLPASALTGALVLS
MASVASKNLIPGVIIPVGIVTSLVGVPFFLSIILRHRGNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 3e-79 75
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 4e-48 44