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Name : W5S_1036 (W5S_1036) Accession : YP_006282022.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1133094 - 1135670 bp Length : 2577 bp Strand : + Note : - DNA sequence : ATGCGTCTGGATCGTCTTACCAACAAATTCCAACTTGCTCTTGCCGATGCCCAATCTCTTGCCCTTGGGCGCGATCACCA GTTTATTGAATCACTTCATTTGATGAGCGCTTTGCTTCATCAGGGCGGAGGAACTGTTGGTCCACTTCTGACTGTCGCAG GAGCTAATCTTAATTACCTGAAAGCCGAAATCGACCAGGCAATCGCGCGTTTGCCGCAGGTTGAAGGTACGGATGGTGAT GTCCAACCTTCGAACGAATTAGTTCGCGCATTGAATATGTGCGACAAACTCGCGCAAAAGCGTGGCGATACCTTTATTTC CTCGGAACTTTTTGTGCTTGCAGCTTTGGAGTCTCGCGGCACATTGGTGGATATATTGAAAAAGGCGGGTGTCACGCAGC AAAATGTAACAAACGCGATTGATCAAGTGAGAGGAGGGGAGCAAGTGAACGATCAGGGGGCTGAAGATCAGCGCCAGGCA TTAAAAAAATTCACGATTGATCTCACGGAACGTGCAGAACAAGGCAAACTCGATCCGGTTATCGGACGTGATGAAGAGAT TCGCCGTACTATTCAGGTTTTACAACGTCGAACCAAAAATAACCCAGTATTAATCGGTGAGCCTGGCGTGGGTAAAACCG CGATAGTCGAAGGGTTAGCTCAGCGTATCGTTAATGGCGAAGTACCTGAAGGCTTGAAAAACAAGCGCGTACTTTCTCTG GATATGGGCGCGCTGGTGGCTGGTGCGAAATATCGCGGTGAGTTTGAAGAACGCTTGAAAGGTGTACTCAACGATCTGTC CAAACAGGAAGGCAATGTCATTCTGTTTATTGATGAGCTGCATACGATGGTGGGTGCAGGTAAAGCCGATGGCGCGATGG ATGCCGGCAATATGCTAAAACCCGCGCTGGCTCGCGGTGAACTGCATTGCGTTGGCGCGACGACGCTGGATGAATATCGT CAATATATTGAAAAGGACGCCGCTCTTGAGCGTCGTTTCCAAAAGGTGTTTGTCGCGGAACCTACCGTTGAAGACACCAT TGCAATTCTGCGCGGGCTGAAAGAGCGCTATGAATTGCACCATCATGTACAAATCACCGATCCGGCGATTGTTGCGGCGG CAATGCTATCCCATCGCTATATCGCGGATCGTCAGTTGCCGGATAAAGCCATTGACCTGATTGATGAAGCGGCATCCAGC ATTCGTATTCAGATTGATTCAAAACCCGAACCCCTTGATCGGCTTGAGCGTCGAATCATCCAGTTAAAGCTGGAGCAACA GGCGCTGAAAAAAGAATCTGATGAAGCTAGTCAGAAGCGGCTTGAATTGCTGAGTGCGGAGCTTGACCAAAAAGAGCGTG AATATTCCCAACAGGATGAAGAGTGGAAAGCAGAAAAAGCGTCACTCACGGGAACGCAGAATGTTAAGGCTTCTTTAGAG CAAGCGAAAATTGCGTTGGAACAGGCTCGACGCCAGGGAGACCTGGGGAGAATGTCTGAACTGCAATACGGCAAAATTCC TGAGCTGGAAAAACAGCTAGCTGCAGCAACGCAGCAAGAAGGAAAAACGGTTCATTTACTGCGTAATCGGGTCACTGATG CTGAAATCGCTGATGTGCTGGCGCGTTGGACTGGAATTCCCGTTTCTCGCATGTTGGAAAGCGAGAAAGAAAAATTATTG CGAATGGAAGATGAACTACACCAGCGAGTGATCGGGCAGAACGAAGCCGTAGAAGCGGTTGCGAATTCTATCCGCCGTAG TCGGGCGGGGTTATCTGACCCTAATCGTCCGATTGGATCGTTCCTATTCCTTGGACCGACAGGCGTTGGGAAAACGGAAC TTTGCAAAACGCTGGCGACTTTCCTCTTCGACAGTGATGATGCGATGGTTCGTATCGATATGTCTGAGTTTATGGAGAAA CACTCTGTTTCACGTTTGGTCGGTGCGCCTCCTGGATATGTCGGTTACGAAGAAGGAGGATATCTGACGGAAGCGGTACG TCGTCGTCCTTATTCGGTCATCTTGCTCGATGAGATCGAAAAGGCACACCCTGATGTGTTCAATATCTTGCTTCAAGTAT TGGATGATGGCCGCCTTACTGATGGTCAGGGTCGAACGGTCGATTTTCGTAATACTGTGGTTATCATGACGTCAAATTTA GGCTCTGACCTTATTCAGGAACGTTTTGGTGAACGCAGCTATACCGAAATGAGAGATATGGTTCTTGACGTCGTTAGCCA CAGCTTCCGGCCTGAGTTTATTAACCGTATCGATGAAGTCGTCGTATTCCATCCGCTGGGAAGGGGGCATATTACGTCGA TCGCACAAATTCAGCTCCAGAGACTGTACAAGCGCCTCGAGGAGCGGGGATATAGCGTCACGATAACGAATGCTGCTTTA GATATGCTAGGAGAAGTCGGTTTTGACCCTGTCTATGGCGCACGTCCGCTTAAAAGAGCGATACAGCAACTGATAGAGAA CCCACTCGCCCAGCAGATACTGGGGGGGAAATTGATACCCGGGAAACCGATCATATTAGATGTTGAAGGCGAACAGATAG TCGCACAACAAGAATAA Protein sequence : MRLDRLTNKFQLALADAQSLALGRDHQFIESLHLMSALLHQGGGTVGPLLTVAGANLNYLKAEIDQAIARLPQVEGTDGD VQPSNELVRALNMCDKLAQKRGDTFISSELFVLAALESRGTLVDILKKAGVTQQNVTNAIDQVRGGEQVNDQGAEDQRQA LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHRYIADRQLPDKAIDLIDEAASS IRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKEREYSQQDEEWKAEKASLTGTQNVKASLE QAKIALEQARRQGDLGRMSELQYGKIPELEKQLAAATQQEGKTVHLLRNRVTDAEIADVLARWTGIPVSRMLESEKEKLL RMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGERSYTEMRDMVLDVVSHSFRPEFINRIDEVVVFHPLGRGHITSIAQIQLQRLYKRLEERGYSVTITNAAL DMLGEVGFDPVYGARPLKRAIQQLIENPLAQQILGGKLIPGKPIILDVEGEQIVAQQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-159 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-103 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_1036 | YP_006282022.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 3e-110 | 44 |
| W5S_1036 | YP_006282022.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 2e-104 | 41 |
