Gene Information

Name : BANAN_07165 (BANAN_07165)
Accession : YP_006280598.1
Strain : Bifidobacterium animalis ATCC 25527
Genome accession: NC_017834
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1739465 - 1742152 bp
Length : 2688 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGAACAGAAATATACGACTTTGGCTCAGGAGGCCTTGGGTGATGCGGTACAGAGCGCCTCGGCCGCCGGCAACCCGCA
GGTTGAGCCGCTGCATTTGCTTGACTCGCTGCTGCGTCAGGAGAACGGGGTCATCGGTGGTCTCATCGAGGCTGTGGGAG
CGAACAGGCAGACGATCGGCGCGCAGGTGCGCAATGCCCTGGTCTCGCTGCCGAGCGCTTCCGGCTCATCGACCGCGCAG
GCTTCGGCCAGCCGCCAGCTGACCACCGCGCTGGCCGATGCCAGCAAGGAAATGAAGGACATGGGAGATGAGTACATCTC
CACCGAGCACCTGCTGCTGGGCATTCTCGACGCCGCCCCGAACGAGGCGGCTAAGATTCTCGAGCAGAACGGCATCACGG
CCGACAAGGTGCGCGCGGCCATCCCGAACGTGCGCGGCGGCGCCAAGGTGACGAGCCCGGACGCCGAGGCCTCGTACAAG
GCGTTGGAGAAGTTCTCCACCGACCTGACGGCCCGTGCGCGTGAAGGCAAGCTCGACCCGGTGATCGGCAGGGATCAGGA
GATCCGCCGTGTGATCCAAATTCTGAGCCGCCGCACGAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTGGGCAAGA
CCGCCGTCGTGGAAGGTCTGGCGGAGCGCATCGTGGCCGGCGACGTGCCGAGCACGCTGCAAAACAAGCGCCTCATCAGC
CTCGACCTGGGCTCCATGGTAGCCGGGTCGAAGTACCGCGGCGAATTCGAGGAACGCCTCAAGGGCGTGCTTGACGAGAT
CAAGCAGTCCGACGGCCAGATCATCACCTTCATCGACGAGATCCATACCATCGTTGGTGCCGGTGCGGCCGAAGGCTCGA
TGGACGCGGGCAATATGCTCAAGCCAATGCTGGCCCGTGGCGAGCTGCGCCTGATCGGCGCCACCACGCTCGACGAATAC
CGTGAGAACATCGAGAAGGATCCGGCTCTGGAACGCCGTTTCCAGCAGGTGTTCGTGGGCGAGCCGAGTGTGGAGGACAC
GATCGCCATTCTGCGTGGCCTGAAGCAGCGCTATGAGGCCCACCACAAGGTGACGATCGGCGACGACGCGCTCGTGGCCG
CCGCAACCCTCTCGAACCGCTACATCACCGGTCGTCAGCTGCCTGACAAGGCCATCGACCTGGTGGATGAGGCCGCCGCG
CACCTGCGCATGGAACTCGATTCGCAGCCCGAGGAGATCGACGAGCTGCAGCGCAAGGTGACGCGCCTCGAAATGGAGGA
GATGCAGCTGAAGAAGGCCGAGGACCCGGCCTCCAAGGATCGTCTCGCCAAACTCCAGAGCGAACTGGCCGACGCCCGCG
AGAAGCTCGCAGGACTCAATGCCCGTTGGAACGCCGAGAAGGAAGGCCATAACAAGGTCGGCGACCTGCGTGCACAGCTC
GACGAGAAGCGCGTCGAGGCCGACAAGGCCACGCGTGAAGGCGACCTGGCGAAGGCGAGCCGCATCCTGTACGGTGAGAT
CCCGGCCATTCAGAAGCAGCTGACCGAAGCCGAGCACGAGGCCGAGAAGGAAGCCGACTTCGCCCATGAGGATGAGCCCA
TGGTCCCCGACCATGTGGACGCCGATTCGGTGGCCGGCATCGTCTCCGAATGGACCGGCATTCCGGTCGGACGCCTCATG
CAGGGCGAGAACGAGAAGCTGCTCAACATGGAGGAGTACCTCAACAAGCGCGTGATCGGCCAGCCAGAAGCCGTCCGTGC
GGTCTCCGACGCCGTACGCCGTTCGCGTGCAGGCCTGTCCGACCCGAATCGCCCGACCGGTTCGTTCCTGTTCATGGGCC
CGACCGGCGTGGGCAAGACCGAGCTCGCCAAGGCGCTCGCCGAATTCCTGTTCGACGACGAGAAGGCCATGATCCGCATC
GACATGTCGGAGTACATGGAGAAGTCGTCGGTCTCGCGTCTCATCGGCGCAGCCCCGGGCTATGTCGGTTACGATGAGGG
CGGCCAGCTCACCGAGGCCGTGCGCCGCCGTCCGTATTCGGTGGTGCTGTTCGACGAGGTGGAGAAGGCCAATTCCGAGG
TCTTCGACATTCTGCTGCAGGTGCTCGACGACGGTCGCCTGACCGATGGTCAGGGCCGTACCGTGGATTTCAAGAACACG
ATCCTGATCATGACGTCGAACCTCGGCTCGCAGTTCCTGGTCAATCCCGACCTAGATGAGCAGCAGAAGAAGGACGCCGT
GATGAACGCGGTGCACAGCCAGTTCCGTCCGGAGTTCCTCAACCGCCTCGACGACATGGTGATCTTCCACCCGCTCACGC
GTCAGGAGCTCGGTAAGATCGTCGACCTGCAGGTCAAGCAGGTGGCTTCGCGCCTCACCGACCGCCGCATCACGCTCGAC
GTCACCGAAGCGGCACGCGAATGGCTCGCCGACACCGGTTACGACCCGGCATACGGTGCGCGTCCGCTGCGCCGTCTGGT
GCAGACCGAGGTGGGCGATCAGCTGGCACGCATGCTGCTCGCCGGCGAAATCAAGGACGGCGACACCGTGCTGGTGGACC
ACACCGGTGGTGAGCACCTCGAACTCACCGACCATACGCACAACCCGATGGAAGGCGACCCGAACCCGGGAGACTCCCAG
ATCACGGTTGACGACAAGAAGGATGACGGCGAACAGAAGGGCGCCTGA

Protein sequence :
MEQKYTTLAQEALGDAVQSASAAGNPQVEPLHLLDSLLRQENGVIGGLIEAVGANRQTIGAQVRNALVSLPSASGSSTAQ
ASASRQLTTALADASKEMKDMGDEYISTEHLLLGILDAAPNEAAKILEQNGITADKVRAAIPNVRGGAKVTSPDAEASYK
ALEKFSTDLTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAERIVAGDVPSTLQNKRLIS
LDLGSMVAGSKYRGEFEERLKGVLDEIKQSDGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEY
RENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYITGRQLPDKAIDLVDEAAA
HLRMELDSQPEEIDELQRKVTRLEMEEMQLKKAEDPASKDRLAKLQSELADAREKLAGLNARWNAEKEGHNKVGDLRAQL
DEKRVEADKATREGDLAKASRILYGEIPAIQKQLTEAEHEAEKEADFAHEDEPMVPDHVDADSVAGIVSEWTGIPVGRLM
QGENEKLLNMEEYLNKRVIGQPEAVRAVSDAVRRSRAGLSDPNRPTGSFLFMGPTGVGKTELAKALAEFLFDDEKAMIRI
DMSEYMEKSSVSRLIGAAPGYVGYDEGGQLTEAVRRRPYSVVLFDEVEKANSEVFDILLQVLDDGRLTDGQGRTVDFKNT
ILIMTSNLGSQFLVNPDLDEQQKKDAVMNAVHSQFRPEFLNRLDDMVIFHPLTRQELGKIVDLQVKQVASRLTDRRITLD
VTEAAREWLADTGYDPAYGARPLRRLVQTEVGDQLARMLLAGEIKDGDTVLVDHTGGEHLELTDHTHNPMEGDPNPGDSQ
ITVDDKKDDGEQKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-164 46
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-109 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-110 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-110 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BANAN_07165 YP_006280598.1 ATP-dependent chaperone ClpB VFG2084 Protein 3e-112 43
BANAN_07165 YP_006280598.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-121 42