|
Name : pchD (BP1026B_II0644) Accession : YP_006277304.1 Strain : Genome accession: NC_017832 Putative virulence/resistance : Virulence Product : salicyl-AMP ligase Function : - COG functional category : - COG ID : - EC number : - Position : 797554 - 799197 bp Length : 1644 bp Strand : - Note : - DNA sequence : TTGCCCGCCGCCGCGCGCAACGCCGCGTCGAGCGACGCGCCCGACTGGCCCGACGACTTCGCGCGCCGCTACCGCGCCGC CGGCTACTGGCGAGACGAGACCTTCTACGGCGCGCTCGCCGATCGCGCGCGGCGCAGCCCCGCCGCGACCGCGGTCGTCG ACGGCGAGCGCCGCGTCAGCTACCGCGCGCTGCTCGAGCGCATCCGGCGTCTCGCCGGCGGCTTGCGCCGCCTGGGCCTC GCGCGCGGCGACACGGCCGTCGTGCATCTGCCGAACGGCGTGCGCTTCATCGAAGCGTGCTTCGCGTTGTTCCAGCTCGG CGTGCGCCCGGTGCTCGCGCTGCCCGCGCATCGGCAACACGAGATCGGCGCGTTCTGCCGCTTCACGAATGCCCGCGCAT ATCTCGGCGCGGCCCGGCTCGGCGAGTTCGACTGCCGCCCGCTCGCTCACGCACTGCGGGCGAGCTGCCCGGCGCTCGCG CACATCGTCGTCGCGGGCGACGATCATGCCTTCTTGCATTTCGATTCGCTGTACGACGCGCCGCCCGTCGCCGACTGCGC GGCGCGCGCGGACGACATCGCGTGCTTCCAGCTCTCGGGCGGCACGACGGGCACGCCGAAACTGATTCCGCGCCGCCATC GCGAGTACCTGTACAACGTGCGCGCGTGCTCGGACGCGAGCGGCTTCGGCGCCGACACCGTCTATCTGGCCGCGCTGCCG ATGGCGCACAACTTCACGCTGTGCTGCCCCGGCGTGATCGGCGCGCTGCTCGCGGGCGGCCGCGTCGTCGCGACCGAGCA CCCCGAGCCGGAGTGCGGCTTTGCGCTGATCGCGCGCGAGCGGGTCACGCATACGGCGCTCGTCCCGCCGCTCGCGCTAC TGTGGCTGGACGCGCAGCGCGAGCGCCGAGCGGACCTGTCGAGCCTGCGCGTGCTGCAGGTCGGCGGCGCGCGGCTGATG GACCACGCGGCCGAACGCGTGACGCCCGTCCTCGGCTGCCGGCTGCAACAGGTATTCGGAATGGCCGAAGGCCTCATCTG CTGCACGCGGCTCGACGATCCGCCCGCGCGCATCGCGCGTACGCAGGGTCGGCCGGTGTCGCCCGCCGACGAAGTGCGCA TCGTCGACAAGGCGGGCCGCGCCGTCGCGCCTGGCGAGATCGGCGAATTGCAGGTGCGCGGGCCCTATACGATCCGCGGC TACTACCGGCTCGCCGAGCATCATGCGGCCGCGTTCACGGCCGACGGCTTCTATCGCAGCGGCGACCGCGTGCGCCGCAC CGAAGAAGGCGACCTCGTCGTCGAGGGCCGCGACAAGGACCAGATCAATCGCGGCGGCGAAAAAGTATCCGCCGAGGAAG TCGAGAACCTGCTGCTCGCGCATTCGCAAATCCGCGACGCGGCGCTCGTCGCGATGTCCGATCCGCTGCTCGGCGAGCGC ACGTGCGCGTTCGTCGTCGCGCGCCCGCCCGCGCCGACCTCGCTCGCGCTGAAGCGGCATTTGCGCGACCACGGGCTCGC CGCGTTCAAGATTCCCGATCGCATCGAATTCGTGCCGAGCTTTCCGGAAACCGGCATCGGCAAGACCAGCAAGAAATCGC TGCGCGACCTGCTGCGCCGCCGGCTCGAAGCGGCGCGCGCATGA Protein sequence : MPAAARNAASSDAPDWPDDFARRYRAAGYWRDETFYGALADRARRSPAATAVVDGERRVSYRALLERIRRLAGGLRRLGL ARGDTAVVHLPNGVRFIEACFALFQLGVRPVLALPAHRQHEIGAFCRFTNARAYLGAARLGEFDCRPLAHALRASCPALA HIVVAGDDHAFLHFDSLYDAPPVADCAARADDIACFQLSGGTTGTPKLIPRRHREYLYNVRACSDASGFGADTVYLAALP MAHNFTLCCPGVIGALLAGGRVVATEHPEPECGFALIARERVTHTALVPPLALLWLDAQRERRADLSSLRVLQVGGARLM DHAAERVTPVLGCRLQQVFGMAEGLICCTRLDDPPARIARTQGRPVSPADEVRIVDKAGRAVAPGEIGELQVRGPYTIRG YYRLAEHHAAAFTADGFYRSGDRVRRTEEGDLVVEGRDKDQINRGGEKVSAEEVENLLLAHSQIRDAALVAMSDPLLGER TCAFVVARPPAPTSLALKRHLRDHGLAAFKIPDRIEFVPSFPETGIGKTSKKSLRDLLRRRLEAARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp5 | YP_002346898.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 4e-100 | 50 |
| ybtE | NP_669710.1 | salicyl-AMP ligase | Virulence | HPI | Protein | 4e-100 | 50 |
| ybtE | NP_993003.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 4e-100 | 50 |
| ybtE | YP_070120.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 4e-100 | 50 |
| ybtE | CAA21394.1 | - | Virulence | HPI | Protein | 4e-100 | 50 |
| ybtE | AAA93464.1 | yersiniabactin 2,3-dihydoxybenzoate-AMP ligase | Virulence | HPI | Protein | 3e-100 | 50 |
| ybtE | YP_853079.1 | yersiniabactin siderophore biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 5e-100 | 50 |
| irp5 | CAA73130.1 | Irp5 protein | Virulence | HPI | Protein | 3e-99 | 49 |
| irp5 | YP_001006819.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 4e-99 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pchD | YP_006277304.1 | salicyl-AMP ligase | VFG0168 | Protein | 1e-161 | 69 |
| pchD | YP_006277304.1 | salicyl-AMP ligase | VFG0932 | Protein | 5e-96 | 46 |
| pchD | YP_006277304.1 | salicyl-AMP ligase | VFG1817 | Protein | 6e-88 | 45 |
