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Name : tssF-3 (BP1026B_II0201) Accession : YP_006276879.1 Strain : Genome accession: NC_017832 Putative virulence/resistance : Virulence Product : type VI secretion system Function : - COG functional category : - COG ID : - EC number : - Position : 237094 - 238983 bp Length : 1890 bp Strand : + Note : - DNA sequence : GTGGACCCGCAATTGCTCGACTACTACAACCAGGAACTGATCTACATGCGCGAGCTCGGCGCCGAGTTCGCGCGCGCGCA CCCGAAGATTGCGCGGCGCCTCGGAATGCAGGCGGGCGAAGTGGCCGATCCGTACGTCGAGCGGCTGATCGAATCGTTCT GCTTCATGGCCGCGCGCATGCAGATCAAGCTCGATGCGGAATTTCCGCGCTTCACCGGCCGCCTGCTCGAGGTGCTCTAT CCGAACTATGTCGCGCCGACGCCGTCGATGGCGGTCGCGCGCCTGTACCCGAGCCGCACCGAAGGCAATCTCGCGCAAGG CTTTCGCGTCGCGCGCGGCACCGCGTTTGCCGCGCGCGTGCCGGCCGGCGAGAAAACCGCGTGCCGGTTTCGCAGCGGCC AGGACGTGACGCTCTATCCGCTCGAGATCGCCGACGCGCGGCTGACGGGGATTCCGCCGGACATCCCGGCGCTCGACCGC TACGTGCCGGCCGGCGCGCAGGTGCGCGGCGCGCTGCGCCTGCGGCTGCGCACGACCGGCAACATGCGCATCGCCGATCT GCGGGGCCTCGACCGGCTGCCGCTGTATCTCGCGGGCGACGCTCAGGTGGCCTCGCACCTGTTCGAGCTGCTGCACGTGG CCGGCGTCGCGACGCTCACGGCCGCGCCCGGCGAGTTCGCCGCGCCGGGCCGCCCGCCCGCGGCGGTTACCGTCGACGCG CTCGCTCACGAAGGGCTCGGCGCCGACGAGGGGCTGTTGCCGCTCACGTGGGCGAAGTTCCATGGGCACAACCTGCTGCA CGAATACTTCGCGTGCCCGGAGCGCTTCTATTTCGTCGCGCTGACGGGGCTCGAGGAAGGGTTGCGGCGCATCGCGGGCA GCGAGGTCGAAATCGTCGTGCTGCTCGAACAATCGCCCGAGCGGCTCGCGGACGTCGTCGACGCGTCGCGCTTCGCGCTG TTCTGCACGCCGGTGATCAACCTGTTTCCGCGCCACATGGACCGGATCGAACTGTCGAGCGGGCAGACCGAATGCCATCT GGTGCCGGCCCGCCTCGCGCCGCTCGACTACGAAGTATTTTCCGTCGAGGCGATGTACGGGCAGGTCGCCGCGACATCGG CCGAACTCGAGTTCCGGCCGCTGTACCAGACGCTGAACGACGACGAGAGCAACTATGGACGCTATTTCTCGACGCGGCGC GAGCGCCGGCTCGTGTCGGATTTCGCGCGCCGCTACGGCACGCGCACGCCGTACGTCGGCACGGAGATGTTCGTATCGCT CGTCGATCAGAACGAGGCGCCCTACAGCGAGGACATCCGCTATCTGTCGGTGGACGCGCTGGTGACGAACCGCGACCTGC CGAGCCTCGTGCCGCGCGACGGCGTGCGCGACCTCACGGCGATCGAATCCGCGCCGATCGACAGCGTCGGCCTGATCCGC GCGCCGTCCGCGCCGAAGGCGCCGTATGCGGAGCGCGAGATCGCGTGGCGGCTGATCCGCCAGTTGAACTTCAACTATCT GCCGCTCGACGAGCTCGACCATCGCGCGGGCGGACAGGGCCTGCGCGGCCTGCTGCGGCTGTTTCTGGCGGGCGACGAGG CCGACAGCCGGCGGCAGGTGGAAAGCCTTGTCGGCGTGAAGACGCGGCCCGTCACGCGCAAGCTGCCCGGCGCGGGCCCG CTCGTGTTCGGGCGCGGCGTCGAGTGCGCGCTGAGCGTCGACGAAACGGGCTTCTCCGGCGTGAGCCCGTATCTGTTCGG GCTCGTGCTCGAGCATTATCTAGCGCGGCACGTGTCGATCAACGTGTTCACGCAGACCGAGCTGAACTCGATCCAGCGCG GCCGCATCGCGCGCTGGCCGGTGCGCATGGGCGCGCGGGGAGGCGCGTGA Protein sequence : MDPQLLDYYNQELIYMRELGAEFARAHPKIARRLGMQAGEVADPYVERLIESFCFMAARMQIKLDAEFPRFTGRLLEVLY PNYVAPTPSMAVARLYPSRTEGNLAQGFRVARGTAFAARVPAGEKTACRFRSGQDVTLYPLEIADARLTGIPPDIPALDR YVPAGAQVRGALRLRLRTTGNMRIADLRGLDRLPLYLAGDAQVASHLFELLHVAGVATLTAAPGEFAAPGRPPAAVTVDA LAHEGLGADEGLLPLTWAKFHGHNLLHEYFACPERFYFVALTGLEEGLRRIAGSEVEIVVLLEQSPERLADVVDASRFAL FCTPVINLFPRHMDRIELSSGQTECHLVPARLAPLDYEVFSVEAMYGQVAATSAELEFRPLYQTLNDDESNYGRYFSTRR ERRLVSDFARRYGTRTPYVGTEMFVSLVDQNEAPYSEDIRYLSVDALVTNRDLPSLVPRDGVRDLTAIESAPIDSVGLIR APSAPKAPYAEREIAWRLIRQLNFNYLPLDELDHRAGGQGLRGLLRLFLAGDEADSRRQVESLVGVKTRPVTRKLPGAGP LVFGRGVECALSVDETGFSGVSPYLFGLVLEHYLARHVSINVFTQTELNSIQRGRIARWPVRMGARGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0289 | NP_454871.1 | hypothetical protein | Not tested | SPI-6 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssF-3 | YP_006276879.1 | type VI secretion system | VFG2074 | Protein | 4e-116 | 45 |
