Gene Information

Name : bsaS (BP1026B_II1637)
Accession : YP_006278271.1
Strain :
Genome accession: NC_017832
Putative virulence/resistance : Virulence
Product : ATP synthase SpaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2063761 - 2065068 bp
Length : 1308 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGCCGCCGGCGATCCGCTGCGGCTTCTCGCGCGGCGCGCGCATCCGCGCCGCATCCAGGGGCCCATCATCGAGGC
GCCGCTGCCGGAGGTCGCGATCGGCGAGCTGTGCGCGATTCGCGCGGCGGCGGGCAGCGATACGACGATCGGCCGCGCGC
AGGTGGTGGGCTTCGGGCGCGACACCGCGATCCTGAGCACGCTCGGCAGCACGGCCGGGCTGTCGCGGCAGGTCGCGCTC
GTGCCGACCGGCGAGCGGATGACGATCGACGTGTCGCCGGCGCTGCTCGGCGCGGTCGTCGACGCGACGGGCGGCATCGT
CGAGACGTTCGGCGCGCCGCCGCCGGCGGGCGCGGCGCCGGGCCGCCGCGCGATCGACGCCGCGCCGCCCGATTACGCGG
CGCGGCGGCCGATCGAGCGCCGGCTCGCGACGGGCGTGCGCGCGATCGACGGGCTGCTCGCGTGCGGCGTCGGCCAGCGT
TTCGGCATCTTCGCGGCCGCGGGCTGCGGCAAGACTTCGCTGATGAACATGATGATCGAGCATGCGGCGGCCGACGTGTA
TGTGGTCGCGCTGATCGGCGAGCGCGGCCGCGAGGTGTCCGAGTTCGTCGAGCGGATGCGGCGCTCGGGCAGCCGGGACC
GCACGGTCGTCGTGTACGCGACGTCGGACCGCTCGTCGGTGGACCGCTGCAACGCGGCGCTCGTCGCGACGACGATCGCC
GAGTATTTCCGCGATCTCGGCTGCGACGTGATGCTGTTTCTCGATTCGATGACGCGCTACGCGCGCGCGTTGCGCGACCT
CGCGCTCGCGACGGGGGAGGCGCCCGCGCGGCGCGGCTATCCGGCCTCGGTGTTCGAGCAGTTGCCGCGCCTGCTCGAGC
GGCCCGGGCGCACGAGGGCGGGCAGCATCACGGCGTTCTACACGGTGCTGCTCGAAAACGAAGAGGAGCCCGATCCGATC
GGCGACGAGATCCGCTCGATCGTCGACGGCCACGTGTATCTGAGCCGGCAGCTCGGCGCGAAGGGCCATTTTCCGGCGAT
CGACGTGCTCAGGAGCGCGAGCCGCCTGTTCGACGAGATCGCCGACGCGCCGCATCGCGCGCTCGCGAAGCGGTTCCGGC
AGCACCTCGCGCGCATCGACGAGATGCAGGTGTTTCTCGATCTCGGCGAATACCGGCGCGGCGAGAACCCGGAGAACGAC
GATGCGCTCGACCGGCGGCCGGCGCTCGACGCGTTCCTGCAGCAGGCCGTCGACGAGGCGTCGGCGTTCGGCGACACGCT
CGAACGGCTGAGCGAGGCCGCGTCATGA

Protein sequence :
MKAAGDPLRLLARRAHPRRIQGPIIEAPLPEVAIGELCAIRAAAGSDTTIGRAQVVGFGRDTAILSTLGSTAGLSRQVAL
VPTGERMTIDVSPALLGAVVDATGGIVETFGAPPPAGAAPGRRAIDAAPPDYAARRPIERRLATGVRAIDGLLACGVGQR
FGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIA
EYFRDLGCDVMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLERPGRTRAGSITAFYTVLLENEEEPDPI
GDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRALAKRFRQHLARIDEMQVFLDLGEYRRGENPEND
DALDRRPALDAFLQQAVDEASAFGDTLERLSEAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 4e-101 60
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-100 58
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-100 58
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-100 58
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 9e-100 58
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-98 58
invC AAS66861.1 InvC Not tested SSR-2 Protein 5e-99 57
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-72 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-73 47
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-73 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-72 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-72 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-73 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-73 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-72 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-63 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-72 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-72 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-57 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-57 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-59 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-60 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-60 44
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-60 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-59 44
escN AAL57542.1 EscN Virulence LEE Protein 5e-57 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-57 44
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-57 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-57 44
escN AAC38383.1 EscN Virulence LEE Protein 3e-57 44
escN AAC31513.1 L0034 Virulence LEE Protein 2e-57 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-57 44
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-56 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-57 44
escN AAK26715.1 EscN Virulence LEE Protein 5e-57 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-57 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-56 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-56 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-58 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-58 43
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-52 42
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-58 42
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-58 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-65 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 7e-56 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 7e-56 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 7e-59 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 8e-59 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 8e-59 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 6e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bsaS YP_006278271.1 ATP synthase SpaL VFG2459 Protein 2e-161 100
bsaS YP_006278271.1 ATP synthase SpaL VFG0555 Protein 4e-100 58
bsaS YP_006278271.1 ATP synthase SpaL VFG1778 Protein 2e-93 56
bsaS YP_006278271.1 ATP synthase SpaL VFG1008 Protein 9e-96 52
bsaS YP_006278271.1 ATP synthase SpaL VFG0048 Protein 2e-75 48
bsaS YP_006278271.1 ATP synthase SpaL VFG0192 Protein 2e-74 47
bsaS YP_006278271.1 ATP synthase SpaL VFG0390 Protein 1e-72 46
bsaS YP_006278271.1 ATP synthase SpaL VFG0515 Protein 6e-60 44
bsaS YP_006278271.1 ATP synthase SpaL VFG2144 Protein 2e-61 44
bsaS YP_006278271.1 ATP synthase SpaL VFG0812 Protein 1e-57 44
bsaS YP_006278271.1 ATP synthase SpaL VFG0730 Protein 1e-57 44