Gene Information

Name : wcbC (BP1026B_I0502)
Accession : YP_006273565.1
Strain :
Genome accession: NC_017831
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis/export periplasmic protein WcbC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 532874 - 534037 bp
Length : 1164 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGCGTCCATTCTGCAAAACGTTTTTGATCGCGTGTGTCATGGGCGCGGTCACGCTCGCCGGTTGCTCAAGTATCCC
TACGTCGGGGGCCAGTGGCGCGCAAATCGCGCGGGCTGCGCAGAGTCCATCCGGAATTCAGATCGTCGATGTGACCGAGG
ATGTCGCGCGCCAGCTGTTTGCTGATCGAAACACGGCGGACTTCGTGACGGCGCTGGGCGGCGGTGCGTCGTTCCGGCAA
CAGTTGGGCGTCGGCGATACGATTCAGGTGTCCATCTGGGAGGCGCCACCCGCCACGCTTTTTGGCGCGGCTCAGTCGGA
AGGGAGTTCGGGGCCGGCGAACGCGCGCGTGACGGTGTTGCCCGATCAAGCCATCGATGGCGACGGCAATGTCAATATTC
CGTTTGCGGGCCAGGTGAAGGCGGCCGGCCGCTCGCCCACGCAGTTGGCGCGTGAGATTGCCGCGCGGCTGAAGAGCATG
GCGCACGATCCGCAAGTGCTCGTGAAGCTTTCACGCAACGAGACGTCATATGTGACGGTCGTGGGCGATGTGGCCGAAAA
CGCTCGCATGGCTCTGACCGCTCGGGGCGAGCGCCTGCTTGATGCATTGGCGAGCGCAGGCGGGGCGAAGCACCCGGTTG
ACAAAGTTACGATCCAGATAACGCGCGGCAAGACGGTGGCCTCGTTGCCGCTCGACATGGTTATTCGTGATCCGCGGCAG
AACGTCCCGTTGCATGCGGGCGACGTGGTCACTGTCCTGTTTCAGCCGTATAGCTTTACGGTGCTCGGCGCGACGGGCAA
GAATGACGAAATCAATTTTGAAGCGAAGGGCATCACGCTTGCGCAGGCCCTGGCGCGTGCTGGCGGCTTGCAGGATTCGC
GCGCCGATGCAAAGGGCGTATTCATCTTCCGACTTGAAGACGCCAACGCGCTGAAATGGCCGACGGCTCCCGTGCGTACG
ACTGCGGATGGAAAGGTGCCTGTCGTGTATCGCGTGAATCTTCGCGATCCGAATTCGTTCTTCGTGGCTCAGAGCTTCAG
GGTCGACAACAACGATCTGTTGTACGTTTCGAATGCGCCGATTGCCGAACTTCAAAAATTCTTGAATGTCGTGTTCTCCG
TTGCGTATCCGGTGATTACCGGCGTTCAGACAGTCAGGTACTGA

Protein sequence : 
MSRPFCKTFLIACVMGAVTLAGCSSIPTSGASGAQIARAAQSPSGIQIVDVTEDVARQLFADRNTADFVTALGGGASFRQ
QLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSM
AHDPQVLVKLSRNETSYVTVVGDVAENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQ
NVPLHAGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITLAQALARAGGLQDSRADAKGVFIFRLEDANALKWPTAPVRT
TADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLNVVFSVAYPVITGVQTVRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 9e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wcbC YP_006273565.1 capsular polysaccharide biosynthesis/export periplasmic protein WcbC VFG2566 Protein 1e-172 100
wcbC YP_006273565.1 capsular polysaccharide biosynthesis/export periplasmic protein WcbC VFG0255 Protein 4e-66 42