Gene Information

Name : fliP (BP1026B_I0032)
Accession : YP_006273107.1
Strain :
Genome accession: NC_017831
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 30924 - 31685 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACCGCTTGCCTGCGCGGCGCGGCGCGCTGGCTGCCCGCGATCCTGATCGGCCTCGCGCCCGCGCTCGCGTGCGC
GCAGGCGGCCGGGCTGCCGGCGTTCAACTCGGCGCCGGGCCCGAACGGCGGCACGACCTATTCGTTGAGCGTGCAGACGA
TGCTGCTGCTCACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACGAGCTTCACGCGGATCATCATCGTGCTG
TCGCTGCTGCGGCAGGCGATCGGCACCGCGTCGACGCCGCCGAATCAGGTGCTCGTCGGGCTCGCCCTCTTCCTCACGCT
GTTCGTGATGTCGCCCGTGCTCGACCGCGCGTACAACGACGCGTACAAGCCGTTTTCCGAGGGCACGCTGCAGATGGACC
AGGCGGTGCAGCGCGGCACCGCGCCCTTCAAGGCGTTCATGCTCAAGCAGACGCGCGAGACCGATCTCGCGCTGTTCGCG
AAGATCTCGAAGGCCGCGCCGATGCAGGGGCCGGAGGACGTGCCGCTGTCGCTGCTCGTGCCGGCGTTCGTCACAAGCGA
GCTGAAGACGGGGTTCCAGATCGGCTTCACGATCTTCATCCCGTTTCTCATCATCGACATGGTTGTCGCGAGCGTGCTGA
TGTCGATGGGGATGATGATGGTGTCGCCCGCGACGGTGTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTCGTCGACGGC
TGGCAGTTGCTGATCGGCTCGCTCGCGCAGAGCTTCACCTAG

Protein sequence :
MKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVL
SLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLALFA
KISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATVSLPFKLMLFVLVDG
WQLLIGSLAQSFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-27 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-28 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 8e-27 41
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 1e-15 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 4e-16 41
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 5e-14 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 5e-14 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 8e-29 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 8e-29 41
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 8e-23 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-24 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 4e-15 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 4e-15 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006273107.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-93 99
fliP YP_006273107.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-64 69
fliP YP_006273107.1 flagellar biosynthesis protein FliP VFG1259 Protein 8e-56 62
fliP YP_006273107.1 flagellar biosynthesis protein FliP VFG2016 Protein 8e-52 56
fliP YP_006273107.1 flagellar biosynthesis protein FliP VFG0394 Protein 5e-25 41
fliP YP_006273107.1 flagellar biosynthesis protein FliP VFG0188 Protein 1e-25 41