Gene Information

Name : ACPL_1066 (ACPL_1066)
Accession : YP_006264031.1
Strain : Actinoplanes sp. SE50/110
Genome accession: NC_017803
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein yycF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1101079 - 1101768 bp
Length : 690 bp
Strand : +
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAGAGCCCGGGTACTGGTCGTCGACGACGATCCCGCGTTGGCCGAGATGCTCGGCATCGTCCTGCGCAGTGAGGGATT
CCTGCCCTCGTTCGTGGCGGACGGCGAACGCGCGCTCGCCGCTTTCCGGGAGAATCGCCCGGACATCGTTCTGCTGGATC
TGATGCTCCCCGGGATGAGCGGCATCGACGTCGCGCGCGCGATCCGTGCCGAGTCCGGCATTCCGATCGTCATGCTCACC
GCCAAGAGCGACACCGTGGACGTGGTGCTCGGCCTGGAGTCCGGCGCCGACGACTACGTGGTGAAACCGTTCAAGCCCAA
GGAGCTGGTCGCCCGGATGCGGGCCCGGTTGCGCCGGGGCGAGGACGCGGCGCCCGAGATGCTCACCATCGGGCCGCCCG
GCAACCAGATAACCATCGACGTGCCGGCGCACACCGTGTCCCGGGACGGCGAGGAGGTCAAGCTCACGCCGCTCGAGTTC
GACCTGCTGGTGGCCCTGGCCCGCAAGCCGCGCCAGGTGTTCACCCGCGAGGTGCTGCTGGAGCAGGTCTGGGGTTATCG
GCACGCCGCGGACACCCGACTGGTCAACGTCCACGTGCAGCGGCTCCGGGCGAAGATCGAGCCGGATCCGGAGCGACCGG
AGATCATCCTGACGGTCCGGGGTGTCGGCTACAAGGCGGGCACCGGCTAG

Protein sequence : 
MRARVLVVDDDPALAEMLGIVLRSEGFLPSFVADGERALAAFRENRPDIVLLDLMLPGMSGIDVARAIRAESGIPIVMLT
AKSDTVDVVLGLESGADDYVVKPFKPKELVARMRARLRRGEDAAPEMLTIGPPGNQITIDVPAHTVSRDGEEVKLTPLEF
DLLVALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRAKIEPDPERPEIILTVRGVGYKAGTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-38 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF AE000516.2.gene3505. Protein 2e-78 76
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_012469.1.7685629. Protein 3e-44 47
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002952.2859905.p0 Protein 1e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002758.1121668.p0 Protein 2e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_007622.3794472.p0 Protein 1e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_009641.5332272.p0 Protein 2e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_013450.8614421.p0 Protein 2e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_007793.3914279.p0 Protein 2e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002745.1124361.p0 Protein 2e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_009782.5559369.p0 Protein 2e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002951.3237708.p0 Protein 2e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_003923.1003749.p0 Protein 1e-42 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_003923.1003417.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_013450.8614146.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002951.3238224.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_007793.3914065.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002758.1121390.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_010079.5776364.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002952.2859858.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_007622.3794948.p0 Protein 3e-38 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_012469.1.7686381. Protein 3e-41 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF BAC0125 Protein 2e-33 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF AE016830.1.gene1681. Protein 3e-43 43
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF HE999704.1.gene2815. Protein 2e-40 42
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF AE015929.1.gene1106. Protein 3e-33 41
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF HE999704.1.gene1528. Protein 3e-33 41
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF CP000034.1.gene2186. Protein 5e-39 41
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF CP001138.1.gene2239. Protein 4e-39 41
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF NC_002695.1.916589.p Protein 4e-39 41
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF BAC0039 Protein 5e-39 41
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF BAC0596 Protein 4e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF VFG1389 Protein 4e-32 44
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF VFG1390 Protein 2e-33 42
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF VFG1563 Protein 1e-38 41
ACPL_1066 YP_006264031.1 Transcriptional regulatory protein yycF VFG1702 Protein 9e-39 41