|
Name : clpB (ACPL_208) Accession : YP_006263175.1 Strain : Actinoplanes sp. SE50/110 Genome accession: NC_017803 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : - COG ID : - EC number : 3.4.21.- Position : 100938 - 103523 bp Length : 2586 bp Strand : + Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAACGCCGAACGTCTGACCACGAAGAGCCGCGACGTGATCAAGAGCGCGGTGGCCACCGCCGCGCAGAGCGGCCACGC CACGGTGGAGCCGTGGCACATGCTGCTGTCACTGCTGGACACCGCCGGTTCGACGGCGCCGGCGCTGCTGCGCGCCGTCG GCGCCAACCCGGCCGACGTCCGCCGGGCCGCCGCCCGCGCCGTCGAGCAGCTGCCCAGCGCCCGCGGTGCCAGCACCGCC GAGCCCAGCCTGTCCCGGGAGTTCGTCAACGCGATCGGTGAGGCCGAGCTGATCGCCCAGCCGCTCGGCGACGAATACGT CTCGACCGAGCACCTGCTGGCCGGCCTGGCCCGCGGCGGCGGCGCGGTCAGCCAGACCCTCAAAGCGGCCGGCGCCGCCG AGGACGCGCTGGTGGCGGCATTTCCGCAGGTCCGCGGGGGCGATCGGAAGGTGACCAACGCCGACCCGGAGCAGACCTAC AAGGCGCTGGAGAAGTACAGCGTCGACCTGACCGCGCTGGCCCGCGAGGGCAAGATCGACCCGGTGATCGGGCGGGACGC CGAGATCCGCCGGGTGGTCCAGGTGCTCTCCCGGCGCACCAAGAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGCA AGACCGCGATCGTCGAGGGCCTCGCCCAGCGGATCGTGGCCGGCGACGTACCGGAAACTCTGCGCGACAAGAAACTGGTC TCCCTCGACCTGGGCGCCATGGTCGCCGGCGCGCAGTACCGGGGCCAGTTCGAGGAGCGGCTCAAGAGCGTGCTCGAGGA GATCCGCGGGTCGAACGGGCAGGTCGTCACGTTCCTCGACGAGCTGCACACGGTGGTCGGCGCCGGCAAGGGCGAGGGTT CGATGGACGCCGGCAACATGCTCAAGCCGATGCTGGCCCGCGGTGAGCTGCGGATGGTCGGCGCCACCACGCTGGACGAG TACCGCGAGCACATCGAGAAGGACCCGGCCCTGGAGCGGCGCTTCCAGCCGGTCGTGGTCGGCGAGCCCACCGTCGAGGA CACCATCGGCATCCTGCGCGGGCTCAAGAGCCGGTACGAGGCGCACCACCGGGTGCAGATCACCGACGCCGCCCTGGTCG CCGCGGCCAGCCTGTCCGACCGCTACATCAGCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGATCGACGAGGCCGCC TCCCGGCTGCGCATGGAGATCGACTCGCGGCCGGTCGAGCTGGACCAGCTGCAGCGTCAGGTGGACCGGATGCGGGTGGA GAAGCTCGCCCTCGAACGCGAGACCGACCCGGCCTCAGTGGCCCGGCTGGAGCGGCTCGACCGCGACCTCGCCGACCGCG AGGAGGAGCTGACCGCGCTGAACGCCCGCTGGGAACGCGAGCGCGGCGGCCTGAACCGGGTCGGCGAGCTGAAGAAGCAG CTCGACGAGGCGCGGGCGGCGCAGGAGCGGGCCCAGCGCGACGGCGACCTGCTGCAGGCGTCCCGGCTGCTCTACGAGGT CATCCCGGGCCTGGAGCGGGAGCTGGCGACCGCGGCCGAGTCGGAGGAGGAGACGACCGAGCCGCCGATGGTCAAGGAGG AGGTCGGCGCCGACGACATCGCCGAGGTGATCTCCTCGTGGACCGGCATCCCGGCCGGCCGGATGATGGAGGGCGAGACC GCCAAGCTGCTCCGCATGGAGGAGTCGCTGCAGGCCAAGGTCATCGGCCAGCGCGAGGCCGTGGCCGCGGTGGCCGGCGC GGTCCGCCGGGCGCGGGCCGGCATCGCCGACCCGGACCGCCCCACCGGCAGCTTCCTGTTCCTCGGCCCGACCGGTGTCG GCAAGACCGAGCTGGCCAAGGCGCTGGCCGGCTTCCTGTTCGACGACGAGCGGGCGATGGTCCGGATCGACATGAGTGAG TACGCGGAGAAGCACTCCGTGGCTCGTCTCGTCGGCGCCCCGCCCGGCTACGTCGGATACGAGGAGGGTGGCCAGCTGAC CGAGGCGGTGCGCCGCCGGCCGTACAGCGTCGTCCTGCTCGACGAGGTGGAGAAGGCCCACCCGGACGTGTTCGACGTGC TGCTGCAGGTGCTCGACGACGGGCGGCTCACCGACGGGCAGGGACGCACGGTCGACTTCCGCAACGCGATCCTGGTGCTG ACCTCGAACCTGGGCTCGGCCAACTCGGACTTCACGATGAGCGACGAGGAGCGGCACGACGAGGTGCTCGCCGCGGTGCG GGCGCACTTCAAGCCGGAATTCCTGAACCGGCTCGACGACATCGTGGTGTTCCACGCCCTGACCAGGGACGACCTGATCA GGATCGTCGACATCCAGCTGGCCCGGCTGCGGGCCCGGCTCGCTGAGCGGCGGCTCACCCTGTCGGTGGCCGAGGATGCG GTGGACTGGCTGGGCGAGCACGGGTACGACCCGATCTACGGAGCCCGGCCGCTGCGGCGGCTGGTCCAGGCGACGATCGG GGACCTGCTGGCCAAGGCCCTGCTCGCCGGTGAGATCCGGGACGGGGACACCGTGCAGGTGGCGTTGAACTCGGCGAAGG ACGGGCTGGCGGTCCAGCGCGGCTGA Protein sequence : MNAERLTTKSRDVIKSAVATAAQSGHATVEPWHMLLSLLDTAGSTAPALLRAVGANPADVRRAAARAVEQLPSARGASTA EPSLSREFVNAIGEAELIAQPLGDEYVSTEHLLAGLARGGGAVSQTLKAAGAAEDALVAAFPQVRGGDRKVTNADPEQTY KALEKYSVDLTALAREGKIDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPETLRDKKLV SLDLGAMVAGAQYRGQFEERLKSVLEEIRGSNGQVVTFLDELHTVVGAGKGEGSMDAGNMLKPMLARGELRMVGATTLDE YREHIEKDPALERRFQPVVVGEPTVEDTIGILRGLKSRYEAHHRVQITDAALVAAASLSDRYISDRFLPDKAIDLIDEAA SRLRMEIDSRPVELDQLQRQVDRMRVEKLALERETDPASVARLERLDRDLADREEELTALNARWERERGGLNRVGELKKQ LDEARAAQERAQRDGDLLQASRLLYEVIPGLERELATAAESEEETTEPPMVKEEVGADDIAEVISSWTGIPAGRMMEGET AKLLRMEESLQAKVIGQREAVAAVAGAVRRARAGIADPDRPTGSFLFLGPTGVGKTELAKALAGFLFDDERAMVRIDMSE YAEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILVL TSNLGSANSDFTMSDEERHDEVLAAVRAHFKPEFLNRLDDIVVFHALTRDDLIRIVDIQLARLRARLAERRLTLSVAEDA VDWLGEHGYDPIYGARPLRRLVQATIGDLLAKALLAGEIRDGDTVQVALNSAKDGLAVQRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-88 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006263175.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2084 | Protein | 3e-96 | 42 |
