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Name : clpC (ACPL_8056) Accession : YP_006271002.1 Strain : Actinoplanes sp. SE50/110 Genome accession: NC_017803 Putative virulence/resistance : Virulence Product : Chaperone protein clpB Function : - COG functional category : - COG ID : - EC number : - Position : 8871532 - 8874054 bp Length : 2523 bp Strand : - Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGTTCGAGCGGTTCACCGACCGAGCGCGACGGGTTGTCGTCCTGGCCCAAGAAGAGGCCCGGATGCTCAACCACAACTA CATCGGGACCGAGCACATCCTGCTCGGCCTGATCCACGAGGGCGAGGGCGTCGCCGCCAAGGCTCTGGAGAGCCTGGGCA TCTCCCTCGAGGGCGTCCGGCAGCAGGTCGAGGAAATCATCGGTCAGGGCCAGCAGGCGCCGAGCGGGCACATCCCGTTC ACGCCGCGGGCGAAGAAGGTGCTGGAGCTCTCCCTGCGGGAGGCGCTGCAGCTCGGGCACAACTACATCGGCACCGAACA CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTCAAGCTCGGCGCCGACCTGAACCGGG TGCGCCAGCAGGTGATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGCCGGCCGCCGCGGGCACCGCCACCGGCGAGGCC GCGCCGTCCACCTCGCTGGTCCTCGACCAGTTCGGGCGCAACCTCACGCAGGCCGCCCGGGAGGGCAAGCTCGACCCGGT GATCGGCCGGGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTCTCCCGCCGCACCAAGAACAACCCGGTGCTGATCGGCG AGCCGGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGTCCCAATCCATCGTCAAGGGCGAGGTGCCCGAGACGCTCAAG GACAAGCAGCTCTACACGCTCGACCTGGGCGCCCTGGTCGCCGGCTCGCGGTACCGCGGTGACTTCGAGGAGCGCCTGAA GAAGGTGCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGATCCACACCCTGGTCGGCGCCGGCG CCGCCGAGGGCGCGATCGACGCCGCCTCGATCCTGAAGCCCATGCTGGCGCGTGGCGAGCTGCAGACCATCGGTGCGACC ACCCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCCGATCCAGGTCGGCGAGCC GTCGCTCGCGCACACCATCGAGATCCTCAAGGGCCTGCGCGACCGGTACGAGGCGCACCACCGGATCAGCATCACCGACG CTGCCCTGGTGGCCGCCGCGACGCTGGCCGACCGGTACATCTCCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGATC GACGAGGCCGGCGCACGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGTGACTTCGACGAGCGCATCGCCCA GGTGCGTCGCGACAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGCGCGCCGCCCAGCTGCGCGACAAGGAGAAGCAGC TGCTCGGCCAGAAGGCCCAGCGGGAGAAGGAGTGGAAGGCCGGCGACCTCGACGTCGTGTCCGAGGTCGACGACGAGCAG ATCGCCGAGGTGTTGGGCAACTGGACCGGCATCCCGGTCTACAAGCTCACCGAGGAGGAGACCTCCCGCCTGCTGCGCAT GGAGGACGAGCTGCACAAGCGCGTCATCGGCCAGGAGGACGCGGTCAAGGCCGTCTCCAAGGCGATCCGGCGTACCCGTG CCGGGCTGAAGGACCCGAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCC AAGGCGCTCGCCGAGTTCCTGTTCGGCAGCGAGGACGCGCTGATCCAGCTGGACATGTCCGAGTTCCACGACCGGTACAC GGTGTCCCGCCTGGTCGGTGCCCCTCCCGGTTACGTCGGCTACGACGAGGGCGGCCAGCTCACCGAGAAGGTGCGCCGCA AGCCGTTCAGCGTGGTCCTGTTCGACGAGATCGAGAAGGCCCACCCGGACGTCTTCAACACGCTGCTGCAGATCCTGGAG GACGGTCGCCTGACCGACGGTCAGGGTCGGATCGTGGACTTCAAGAACACGGTCATCATCCTGACCACCAACCTCGGCAC CCGGGACGTGGCGAAGGCGGTGTCGCTGGGCTTCCAGGCCTCGGAGGACACCGAGAGCAACTACGACCGGATGAAGGTCA AGGTCAACGACGAGCTGAAGCAGCACTTCCGCCCGGAGTTCCTCAACCGCATCGACGACACGATCGTCTTCCACCAGCTG CGCGAGCAGGAGATCCTGCAGATCGTCGACATCTTCACCGCGCGGATCGAGGGCCAGCTCAAGAACAAGGACATGGGCCT CGAGCTGACCGACAACGCGAAGAAGTACCTCGCGAAGAAGGGCTTCGACCCGGTTCTCGGCGCCCGGCCGCTGCGCCGGA CGATCCAGCGCGAGCTGGAGGACACGCTGTCCGAGCAGATCCTCTTCAACGAGCTGCGCCCCGGCCAGATCGTGGTGGTG GACTGCGAGGGCGACCCGGCCAACGTGGAGAAGTCCAAGCTGGTCTTCCGCGGCGCGGAGAAGGCGGGAGCCGTGCCCGA CGCGGTGCCGGCCGACCTCGGCGCGACCACCAGCGAGGAGTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPAAAGTATGEA APSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQSIVKGEVPETLK DKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT TLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRISITDAALVAAATLADRYISDRFLPDKAIDLI DEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDKEKQLLGQKAQREKEWKAGDLDVVSEVDDEQ IAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHPDVFNTLLQILE DGRLTDGQGRIVDFKNTVIILTTNLGTRDVAKAVSLGFQASEDTESNYDRMKVKVNDELKQHFRPEFLNRIDDTIVFHQL REQEILQIVDIFTARIEGQLKNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRELEDTLSEQILFNELRPGQIVVV DCEGDPANVEKSKLVFRGAEKAGAVPDAVPADLGATTSEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 76 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006271002.1 | Chaperone protein clpB | VFG0079 | Protein | 0.0 | 61 |
| clpC | YP_006271002.1 | Chaperone protein clpB | VFG0080 | Protein | 6e-148 | 51 |
