Gene Information

Name : ACPL_6868 (ACPL_6868)
Accession : YP_006269818.1
Strain : Actinoplanes sp. SE50/110
Genome accession: NC_017803
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein degU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7567557 - 7568174 bp
Length : 618 bp
Strand : -
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGATCCGGATTCTGCTGGTCGACGATCACCCGGTGGTCCGGATGGGGTTGCGGGGGATGCTCGACGCGGAACCGGACCT
CACGGTGATCGGCGAGGCGTCGGACGGCGCCGAGGGGGCGGAGATCGCGCTGCGGGACCGCCCCGACATCGTGCTGATGG
ACCTGCGGATGCCGGGCGCCGACGGGGTGGAGGCGACCGGCCGGATCCTCGCCGGCGACCCGGGCATCCGGGTGATGGTG
CTGACCACCTACGAGTCCGATCGTGACATCCTGCGCGCGATCGAGGCCGGCGCCAGCGGTTATCTGCTCAAGGACGCGTC
GCCGGCCGACCTCGCCGACGCCGTCCGGGCGGCCGCCCGCGGGGAGACGGTGCTCGCGCCGAGCGTCGCGTCGACCCTGG
TCCGCCAGGTTCGCACACCCGCTCCGCCGGCGCTTTCGGCCCGCGAGACCGAGGTGCTGAAACTGGTTGCGGCCGGCCTC
ACCAACGCCGACATCGGCCGACGCCTGTTCATCTCCGAGGCGACCGTCAAGACGCACCTGCTCCGCGTCTTCAACAAGCT
CGACGTCGCCGACCGCACCGCCGCCGTGACCACCGCCATGCGTCACGACCTTCTGTGA

Protein sequence :
MIRILLVDDHPVVRMGLRGMLDAEPDLTVIGEASDGAEGAEIALRDRPDIVLMDLRMPGADGVEATGRILAGDPGIRVMV
LTTYESDRDILRAIEAGASGYLLKDASPADLADAVRAAARGETVLAPSVASTLVRQVRTPAPPALSARETEVLKLVAAGL
TNADIGRRLFISEATVKTHLLRVFNKLDVADRTAAVTTAMRHDLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 2e-28 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACPL_6868 YP_006269818.1 transcriptional regulatory protein degU VFG2440 Protein 3e-18 41