|
Name : ACPL_670 (ACPL_670) Accession : YP_006263635.1 Strain : Actinoplanes sp. SE50/110 Genome accession: NC_017803 Putative virulence/resistance : Unknown Product : Membrane protein ydfJ Function : - COG functional category : - COG ID : - EC number : - Position : 648459 - 651020 bp Length : 2562 bp Strand : - Note : Predicted drug exporters of the RND superfamily DNA sequence : GTGTCTTCCGCTCTTCACCGCCTCGCCGCCGCCGTCGTCCGACACCGCGGCCGCACCCTCGCCGGCTGGCTGATCACGCT GGTCCTGCTGGCCGGCGGCGGTCTGCTGATCAGCCGCGGCACCGACGACGCGTTCACCATCCCCGGCTCCGAGTCGCAGC AGGCCCTGGACACCCTGAAGCGGGTGTTCCCCGAGGTCAGCGGCTCGTCCGCGCAGATCGTGATCACCGGGGTCGACCCG GCGACGATCAAACCGGAGATCACCGCGGCGGTTCGCCGGGCCGAGCGGCTCGACCAGGTGGTCGCCGTGATCAGCCCGTT CGACGAGCGCTTCCGGGGGAACCGGACCGCCCGGGCGGCGATCGTCACGGTCCAGTTCGACGTGGCGTTCATGGACGTCA AGCCGTCGACCAAGGCCGCGGTCGACGCGATCGGCGCCTCGATCCCGCACGCGAGCGTGGTGGTCGGCGGCGACGCGTAC GCGGACCGGGTGCCCAAACCGAGCCCGGTCGAGGGGCTCGGTCTCGCCGTCGCCCTGATGGTCCTGCTGATCACTTTCGG CTCGCTGGTCGCGGCCGGGCTGCCGCTGCTCACCGCGATCCTCGGCGTCGGCTTGTCGGTCGGCCTGCTGTACGGGGTGA CCCGGGTGGTCACCGTGCCGTCGACCGCGGTCACGCTGGCCATGATGCTCGGGCTGGCCGTCGGCATCGACTACGCGCTG TTCATCCTGTCCCGGCACCGGGACCAGCTGCGCGACGGGCTGAGCGTGGCCGAGTCGATCGCCCGGGCCGTCGCCACCGC CGGGTCCGCGGTCGTCTTCGCCGGCCTGACCGTGGTGATCGCCCTGGTCGGGCTGGTGGTGGCGGGCATACCGTTCCTCA CCACGATGGGGTTGTGCGCGGCGCTCGCGGTGGCCATCGCCGTACTCATCGCCATCACCCTGATGCCCGCCCTCCTCGCG CTGGCCGGCGACCGGATCCGCCCGGCCGCGAAGCCGCGTCAGCGGCAGGGACGGATCTTCGAACGCTGGGTCGGCGCGGT GACCCGGCACCCGGTGATCACCATCGTGGTGCTGCTGGCCGGGCTCGGCGCGCTCACCCTGCCCGCCGGCGAACTGCGGC TGGCACTGCCGGACGGCGCCAGCGAGGCGCCGGGAAGTGTGGCCCGACGGACGTACGACGTGATCTCCGCCGAGTTCGGG CCCGGCTACAACGGTCCGCTCCTGGTCACCGCCGACATCATCGCCTCGCACGACCCGGTCGGCCTGATGACGAAGCTGGG CGCCGAGATCTCCCGGGTGCCCGGCGTCGCGCTGGTCCCGATCGCCACCCCCAACCCGAGCGCCGAGATCGGCATCGTGC AGGTGGTGCCGGCCAGCGCGCCGGACTCACCGGAGACCGTCGCGCTGGTCGCCCGGCTCCGCGCCCTCGAACCACACTTC CGGCAGGAGTACGGCGTGGGCACCGCCGTCACCGGGATCACCGCGGTCGGCGTCGACGTCTCGGCCCGGCTCGGCGGCGC CCTGGTGCCGTTCGGGATCCTCGTCGTCGGCCTGTCCCTGCTGCTGCTGACCATGGTGTTCCGCTCGGTCGCGGTGCCGG TCAAGGCCACCGCCGGCTACCTGCTCTCGGTCGGCAGCGCGTTCGGCGTCACCGCCCTGGTCTTCCAGCGCGGCTGGCTC GCCAACCAGCTGAACGTCGCGCACACCGGCAGCGTGATCAGCTTCCTGCCGATCATTCTGATGGGGGTCCTTTTCGGACT CGCCATGGATTACGAAGTCTTCCTGGTCTCTCGGATCCGGGAGGAGTACGTGCACACCGGCGACGCCCGGCACGCCATCG ACGCTGGTTTCCGGGCCTCCGCGCCGGTCGTGGTCGCCGCCGCGGCGATCATGTTCGCGGTCTTCGCGGCCTTCGTCCCG GAGGGCGCCGCCACCGTCAAACCCATCGCGTTGAGCCTGGCCGTGGGCGTCTTCGTGGACGCCTTCCTGGTCCGCATGAC ACTGGTGCCGGCGGTCCTGGCACTGCTCGGCGACCGCGCCTGGTGGCTGCCGGCCCGCCTCGACCGGGCCCTGCCCTCGT TCGACGTCGAGGGCGCAGGCGTGACCCGCGAACTGGCCCTCGCCGACTGGCCAGAACCGGACAGCACCGACGTGATCGCC GCCGACGGGCTGCCCTTCCTGCCGCGCCAGGTCCGGATCGGCCCCGGCGAACTCGTCGAAGTGGTCGGCGACCCGCACAC GACCAGCGCATTCCTGCTCGCCGTCGGCGGCCGGACCACCGGCGTGTCGGGCCGGATCAAAACCCTCGGCCACGTGCTGC CGCAACGCGCCGGCAGCGTACGCGCGGTCGCCGCGCTGCTGCGCCGCCCGTCGCTGCGTGACATCACCGAGGCGGCCGCC GCCGGCCCACCGCTGCTGCTCATCGACGGCTTCGAACACCTGCCGGAACGCGCCCTCGCGCTGGACGCGCTGCGGGCCGC CGCCGGCCGCGGCAGCACGGTGCTGGTGACCGGTCGTGATCAGCACCCCGACATCACCGAGACCATTGAGGTGTACGCAT GA Protein sequence : MSSALHRLAAAVVRHRGRTLAGWLITLVLLAGGGLLISRGTDDAFTIPGSESQQALDTLKRVFPEVSGSSAQIVITGVDP ATIKPEITAAVRRAERLDQVVAVISPFDERFRGNRTARAAIVTVQFDVAFMDVKPSTKAAVDAIGASIPHASVVVGGDAY ADRVPKPSPVEGLGLAVALMVLLITFGSLVAAGLPLLTAILGVGLSVGLLYGVTRVVTVPSTAVTLAMMLGLAVGIDYAL FILSRHRDQLRDGLSVAESIARAVATAGSAVVFAGLTVVIALVGLVVAGIPFLTTMGLCAALAVAIAVLIAITLMPALLA LAGDRIRPAAKPRQRQGRIFERWVGAVTRHPVITIVVLLAGLGALTLPAGELRLALPDGASEAPGSVARRTYDVISAEFG PGYNGPLLVTADIIASHDPVGLMTKLGAEISRVPGVALVPIATPNPSAEIGIVQVVPASAPDSPETVALVARLRALEPHF RQEYGVGTAVTGITAVGVDVSARLGGALVPFGILVVGLSLLLLTMVFRSVAVPVKATAGYLLSVGSAFGVTALVFQRGWL ANQLNVAHTGSVISFLPIILMGVLFGLAMDYEVFLVSRIREEYVHTGDARHAIDAGFRASAPVVVAAAAIMFAVFAAFVP EGAATVKPIALSLAVGVFVDAFLVRMTLVPAVLALLGDRAWWLPARLDRALPSFDVEGAGVTRELALADWPEPDSTDVIA ADGLPFLPRQVRIGPGELVEVVGDPHTTSAFLLAVGGRTTGVSGRIKTLGHVLPQRAGSVRAVAALLRRPSLRDITEAAA AGPPLLLIDGFEHLPERALALDALRAAAGRGSTVLVTGRDQHPDITETIEVYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 5e-76 | 43 |
