Gene Information

Name : ACPL_5696 (ACPL_5696)
Accession : YP_006268651.1
Strain : Actinoplanes sp. SE50/110
Genome accession: NC_017803
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator ycf27
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6233774 - 6234553 bp
Length : 780 bp
Strand : +
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCCCGGGATCGCTAAGCCGCCGCCGGGACCGGGATAAGGGACGGTTAAGAACCGCCCGGGCGGCCCGGCCCAGCCG
ATACCGTGCAGCCGTGGCGAGACTGCTGTTGATCGAGGACGACCCGGCGATCCGGAACACCCTGCTGCGCGCCCTGCGGG
ATCGTGGGCACGCGGTGGCCGCGGCGCCCGCGGCGATGGCGGGACTCCAGACCGCCCTGGCCGAACGACCGGACCTGATC
GTCCTCGACCTGGGCCTGCCCGACCTCGACGGCCGGGAGCTGCTGCGGATGCTGCGCGCGGTCAGCCGGACCCCGGTGAT
CGTCGCGACCGCCCGGGACGAGGAGACCGAGATGGTCCGGCTGCTCGACGCGGGTGCCGACGACTACGTGGTGAAACCGT
TCACCGCGGCGCAGTTGGACGCGCGGATCCGGGCCGTGCTGCGGCGCGGCTCCGCCACCCCCGGCGAGACGGAACCGGCC
CTGGTCGTCGGCGGGCTGCGGATCGACGTGGCGGCCCGCGAGGTCACCCTGGACGGGACCGGGGTCGACCTCACGCCCCG
CGAATTCGACCTGCTGCACCACCTCGCGGCGCGGGCCGGTCAGGTGGTGACGAAACGGGAGCTGCTCAGCGAGGTGTGGC
AGGTGCCGTACGGCGGGGCGGACAAGACCGTCGACGTACACCTGTCGTGGTTGCGCCGCAAGCTCGGCGAGACCGCGACC
GAACCGCGCTACCTGCACACCGTCCGCGGGGTCGGGGTCAAGCTGAGCGAGCCGGCGTGA

Protein sequence : 
MRPGSLSRRRDRDKGRLRTARAARPSRYRAAVARLLLIEDDPAIRNTLLRALRDRGHAVAAAPAAMAGLQTALAERPDLI
VLDLGLPDLDGRELLRMLRAVSRTPVIVATARDEETEMVRLLDAGADDYVVKPFTAAQLDARIRAVLRRGSATPGETEPA
LVVGGLRIDVAAREVTLDGTGVDLTPREFDLLHHLAARAGQVVTKRELLSEVWQVPYGGADKTVDVHLSWLRRKLGETAT
EPRYLHTVRGVGVKLSEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACPL_5696 YP_006268651.1 putative transcriptional regulator ycf27 HE999704.1.gene2815. Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ACPL_5696 YP_006268651.1 putative transcriptional regulator ycf27 VFG1389 Protein 2e-33 45
ACPL_5696 YP_006268651.1 putative transcriptional regulator ycf27 VFG0596 Protein 7e-29 42
ACPL_5696 YP_006268651.1 putative transcriptional regulator ycf27 VFG1390 Protein 4e-30 41