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Name : clpC (ACPL_5282) Accession : YP_006268237.1 Strain : Actinoplanes sp. SE50/110 Genome accession: NC_017803 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit clpC Function : - COG functional category : - COG ID : - EC number : - Position : 5759740 - 5762343 bp Length : 2604 bp Strand : - Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAGCATCGGACCGATGGGGCCGGGTGGACCCGGTCAGTGGGACGACCTGTTCGCGCGCTTCTTCGGTGCGGCGGAGCC GCGCCGGGCGGCGCAGCGGATCGATATCGCGCGCTACATGAGCAACGACGCCCGCCGGGTGCTGGCCGACGCCGCGCGGC GGGCCGCCGACCTCGGGGCCGGCGACGGCCTCGCCGACCTCGATACCGATCATCTGCTCTGGGCCGTTCTGCAGCAGGAG CCGATGAAGCAGACCGTGCGCCGGGCCGGCGCCGACCCGCAGACCCTGCTCGCCGAGCTGGAGGCGCGACTGGGTGACGA CGCGTCGCGGACCGCGGCGGCGAACCGGCGGGCCGACATGGGCGCCGACCGCGACGGGCCGGAGCAGGTCGCGCTGACCC CGGCCGCCAAGCGGGCGCTGCTGGACAGCCTGCAGATCTCCCGAGCCGTGGGCGCCTCCTACATCGGCCCGGAGCACATC CTGATGGCGCTCGGGCTGAACACCGACTCGGCGGCCGGGCGGATGCTGGCCGGCCGGCTCGACCCCCGGGCCATCCCGAA CCCGGAGACCCCGGCCGGTCCGCCCGGTGGCGGCCAGGGCGGTTCCCGGGGCGGCGGGCGTGGCGGCGCGGCGGCGACCC CGACGCTGGAGCAGTTCGGTGTGGACCTGACCGAGGTGGCCCGGCGCGGCGAGATCGACCCGGTGATCGGCCGGGCCGAC GAGATCGAGCAGGCCGTGGAGATCCTGTCCCGGCGCACCAAGAACAATCCGGTGCTGATCGGCGAGGCCGGGGTCGGCAA GACCGCGATCGTCGAGGGCCTGGCCCAGCGGATCGTGGACGGCGAGGTGCCGCTCACCCTGCAGGACAAGCGGGTGGTGC AGCTGGACCTGGCCGGCCTGGTGGCAGGCACCCGGTACCGCGGCGACTTCGAGGAGCGGCTGCGGAAGATCATCGACGAG ATCCAGGCGTCCGGGGACGGCCTGATCGTGTTCATGGACGAGATCCACACCCTGGTCGGCGCCGGTGGCGGCGGTGAGGG CGGCGGGATGGACGCCGGCAACATGCTCAAGCCGGCCCTGGCCCGCGGGCAGCTGCGGGTGATCGGCGCGACCACGCTGG ACGAGTACCGCAAGCACATCGAGAAGGACGCGGCACTGGCCCGGCGGTTCCAGCCGGTGCTGGTCGGCGAGCCGTCGGTG GAGGACGCGGTGGCGATCCTGCGCGGGCTGCGGGACAACTACGAGGCGCACCACCAGGTGCGGATCACCGATGAGGCGCT GGACGCGGCGGCCGAGCTGTCCGACCGGTACGTCACCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGATCGACCAGG CCGGCGCCCGGGTGCGGCTGCGGGTGAAGACGCCGGACAAGAACCTGCGCGAGCAGGAGTGGCAGCTGGAGCAGCTGTCC CGGGACCGGGACCAGGCGGTGCACGCGGAGAACTACGAGGTCGCCTCGCAGCTGCGGGATCGGATCAACGAGCTCAAGGC GCGGATCGCCGGAGCCGGGGCGGGCGAGGACGGCGTGCCCCGGGTGACCGCGGCCGACGTGGCCGAGGTGGTGTCCCGGG CGACCGGGATCCCGGTGGCGCAGCTGACCGAGGCCGAGCGGGACCGTCTGCTGCGCCTCGAACAGCACCTGCACGAGCAC GTGATCGGACAGGACGACGCGGTGGTCGCGGTCGCCGAGGCGGTCCGCCGCTCGCGGGCCGGGTTGGGTGACCCGGACCG GCCGGTCGGCAGCTTCCTGTTCCTCGGCCCGACCGGGGTCGGCAAGACCGAGCTGGCGCGCTCGCTGGCCGAGGCGCTGT TCGGCGAGGCGGACCGGATGATCCGGCTGGACATGAGCGAGTTCCAGGAGCGGCACACGGTGTCCCGGCTGGTCGGGGCG CCGCCCGGATACGTCGGCTACGACGAGGCCGGGCAGCTGACCGAGGCGGTGCGGCGCCGGCCGTACAGCGTGGTGCTGCT CGACGAGATCGAGAAGGCACACCCGGACGTGTTCAACATCCTGCTGCAGGTGCTCGACGACGGGCGGCTGACCGACAGCC AGGGGCGCACGGTCAGTTTCAAGAACACCGTGTTGATCATGACGAGCAACCTGGGGTCGGACCTGATCAGCGGGACCACC CGCAGCGTGGGCTTCGGCGGCGGCGAGAACGGCCGCTCGCCGGAGGACGAGCTGCGGGACCGGCTGGACCGGCGGCTCAA GGAGCAGCTGCGGCCGGAGTTCATCAACCGGATCGACGAGATCATCATCTTCCGGCAGCTGGAGACCGACCAGCTGCGGA AGATCACCGAGATGCTGCTGGAGTCGACCCGGCGGCGGCTGCACGGGCAGGACGTCACGCTGGAGCTGACCACGGCGGCG GTGGACTGGCTGGCCGACCGCGGGTATCAGCCCGAGTTCGGCGCCCGGCCGCTGCGCCGGACGATCCAGCGGGAGCTGGA CAACCGGCTGTCGAGGATGCTGCTCGCGGCGGACCTGGCGCCGGGGCAGACGGTGACGGTCGACGTCCGCGACGGCGAGC TCGCCTTGGAGGTGTCGTCCCCGGCGAAGGTCACGGCTCGATAG Protein sequence : MSIGPMGPGGPGQWDDLFARFFGAAEPRRAAQRIDIARYMSNDARRVLADAARRAADLGAGDGLADLDTDHLLWAVLQQE PMKQTVRRAGADPQTLLAELEARLGDDASRTAAANRRADMGADRDGPEQVALTPAAKRALLDSLQISRAVGASYIGPEHI LMALGLNTDSAAGRMLAGRLDPRAIPNPETPAGPPGGGQGGSRGGGRGGAAATPTLEQFGVDLTEVARRGEIDPVIGRAD EIEQAVEILSRRTKNNPVLIGEAGVGKTAIVEGLAQRIVDGEVPLTLQDKRVVQLDLAGLVAGTRYRGDFEERLRKIIDE IQASGDGLIVFMDEIHTLVGAGGGGEGGGMDAGNMLKPALARGQLRVIGATTLDEYRKHIEKDAALARRFQPVLVGEPSV EDAVAILRGLRDNYEAHHQVRITDEALDAAAELSDRYVTDRFLPDKAIDLIDQAGARVRLRVKTPDKNLREQEWQLEQLS RDRDQAVHAENYEVASQLRDRINELKARIAGAGAGEDGVPRVTAADVAEVVSRATGIPVAQLTEAERDRLLRLEQHLHEH VIGQDDAVVAVAEAVRRSRAGLGDPDRPVGSFLFLGPTGVGKTELARSLAEALFGEADRMIRLDMSEFQERHTVSRLVGA PPGYVGYDEAGQLTEAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVSFKNTVLIMTSNLGSDLISGTT RSVGFGGGENGRSPEDELRDRLDRRLKEQLRPEFINRIDEIIIFRQLETDQLRKITEMLLESTRRRLHGQDVTLELTTAA VDWLADRGYQPEFGARPLRRTIQRELDNRLSRMLLAADLAPGQTVTVDVRDGELALEVSSPAKVTAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-153 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006268237.1 | ATP-dependent Clp protease ATP-binding subunit clpC | VFG0079 | Protein | 2e-164 | 54 |
| clpC | YP_006268237.1 | ATP-dependent Clp protease ATP-binding subunit clpC | VFG0080 | Protein | 4e-138 | 52 |
