Gene Information

Name : fepC (ACPL_5189)
Accession : YP_006268144.1
Strain : Actinoplanes sp. SE50/110
Genome accession: NC_017803
Putative virulence/resistance : Virulence
Product : iron complex transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 5662632 - 5663471 bp
Length : 840 bp
Strand : +
Note : ABC-type oligopeptide transport system, ATPase component

DNA sequence : 
ATGAGCCGGCTCCGTGGCACCGGGATGACCCTGGCATACGACAAGCGGGTCATCGCCGAACAGTTGAGCGTGGCGATCCC
GGACGGCTCGTTCACCGTCGTCATCGGGCCCAACGCGTGTGGCAAGTCCACCCTGCTGCGGGCGCTGTCCCGGCTGCTCA
AGCCCACCACCGGCACGGTGCTGCTGGACGGGGCCGACGTGCAGTCCCTGCCGACACGTACCGTCGCAAGGGTCCTGGGG
TTGTTGCCGCAGTCCGCCACGGCGCCGGACGGCATCAGCGTCGCCGAACTCGTCTCCCGCGGCCGGTATCCGCACCAGGG
CCTGCTGCGCCGCTGGTCCGCCGAGGACGACCGGATCGTCGCCGAGTCGATGGCCGCCACCGGCGTCGCCGACCTGGCCA
CCCGCAGCGTCGACGAACTCTCCGGCGGTCAGCGCCAGCGGGTCTGGATCGCGATGGCCCTGGCCCAACAGACCCCGCTG
CTGCTGCTCGACGAGCCCACCACCTTCCTCGACGTCGCCCACCAGCTGGAGATCCTCGACCTCTGCGCCGACCTGCACGA
ACGCCAGGGCCGCACACTGGTCGCGGTGCTGCACGACCTGAACCACGCGGCCCGCTACGCCACCCACCTGATCGCCATGC
GCGCCGGCCGGGTGGTCAAGGCCGGGCCGCCCGCGCAGGTGCTGACCGCGAGCCTGGTCGAGGAGGTCTTCGACCTGCCC
TGCCGGGTCATCGACGACCCGGAGACCGGCACCCCGCTGGTCGTCCCGGCCGCCCGCCGCCGAACGGCGGTCCGGCCCCG
GCCACCAGGCGTCCGCGGCAATGATGATCTTCGCTGTTAG

Protein sequence : 
MSRLRGTGMTLAYDKRVIAEQLSVAIPDGSFTVVIGPNACGKSTLLRALSRLLKPTTGTVLLDGADVQSLPTRTVARVLG
LLPQSATAPDGISVAELVSRGRYPHQGLLRRWSAEDDRIVAESMAATGVADLATRSVDELSGGQRQRVWIAMALAQQTPL
LLLDEPTTFLDVAHQLEILDLCADLHERQGRTLVAVLHDLNHAARYATHLIAMRAGRVVKAGPPAQVLTASLVEEVFDLP
CRVIDDPETGTPLVVPAARRRTAVRPRPPGVRGNDDLRC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-67 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-67 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-67 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-67 52
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-60 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-60 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-60 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-54 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 7e-26 41
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_006268144.1 iron complex transport system ATP-binding protein BAC0164 Protein 9e-52 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_006268144.1 iron complex transport system ATP-binding protein VFG0925 Protein 6e-76 58
fepC YP_006268144.1 iron complex transport system ATP-binding protein VFG1042 Protein 8e-52 47