Gene Information

Name : tcrA (ACPL_3329)
Accession : YP_006266292.1
Strain : Actinoplanes sp. SE50/110
Genome accession: NC_017803
Putative virulence/resistance : Virulence
Product : response regulator mprA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3638032 - 3638706 bp
Length : 675 bp
Strand : +
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGCGGATCTTGATCGCCGAGGACGACCCGGCGATGGCCGCCATGCTCCAACGGGCGTTCGAGCGGGCCGGCTACGCCGT
CGACGCCGTCGCCACCGGGACCGACGCGGTGTGGGCGATCACCGAGACCGACTTCGACGCGGCGGTCCTGGACGTGATGA
TCCCGGAGCCGGACGGGATCGAGGTGTGCCGGCAGATCCGGGCCCGGGACCGCTGGGTGCCGGTGCTGATGCTGACCGCC
CGGGACGGCACCGGGGACAAGGTCCGGGGTCTCGACGCGGGCGCCGACGACTATCTGACCAAGCCGTTCGCGCTGGACGA
GCTGATGGCCCGGGTCCGCGCCCTGCTGCGCCGCGAGCCGGCCCAGCGTCCGGCCGTGCTGCGCGTCGGCGACCTGGAGC
TGGATCCGGCCGGGCGGACGGTGCGCCGCGGCGAGAACCGGATCCCGCTGTCGGCGAAGGAGTTCGCCCTGCTGCACGAG
CTGATGCGGCGGGCGGGGGAGACGCTGAGCCGCACCCATCTCATCGAGCACGTCTGGGATTTCGCGTACGACGGTGGCTC
CAACGTGGTCGACGTCTACGTCCGCTATCTGCGCGACAAGGTCGACCGCCCGTTCGGTCGGGACAGCATCCGTACCATCC
GCGGTGCCGGCTACCTGCTCGATCCGGAGGCGTGA

Protein sequence :
MRILIAEDDPAMAAMLQRAFERAGYAVDAVATGTDAVWAITETDFDAAVLDVMIPEPDGIEVCRQIRARDRWVPVLMLTA
RDGTGDKVRGLDAGADDYLTKPFALDELMARVRALLRREPAQRPAVLRVGDLELDPAGRTVRRGENRIPLSAKEFALLHE
LMRRAGETLSRTHLIEHVWDFAYDGGSNVVDVYVRYLRDKVDRPFGRDSIRTIRGAGYLLDPEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-34 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcrA YP_006266292.1 response regulator mprA BAC0125 Protein 9e-46 50
tcrA YP_006266292.1 response regulator mprA BAC0083 Protein 4e-45 50
tcrA YP_006266292.1 response regulator mprA BAC0638 Protein 2e-35 47
tcrA YP_006266292.1 response regulator mprA BAC0197 Protein 5e-42 46
tcrA YP_006266292.1 response regulator mprA BAC0308 Protein 5e-39 44
tcrA YP_006266292.1 response regulator mprA BAC0487 Protein 1e-28 41
tcrA YP_006266292.1 response regulator mprA BAC0347 Protein 2e-36 41
tcrA YP_006266292.1 response regulator mprA BAC0111 Protein 3e-40 41
tcrA YP_006266292.1 response regulator mprA Y16952.3.orf35.gene. Protein 1e-22 41
tcrA YP_006266292.1 response regulator mprA U82965.2.orf14.gene. Protein 3e-25 41
tcrA YP_006266292.1 response regulator mprA AE000516.2.gene3505. Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcrA YP_006266292.1 response regulator mprA VFG1390 Protein 2e-44 48
tcrA YP_006266292.1 response regulator mprA VFG0473 Protein 2e-33 42
tcrA YP_006266292.1 response regulator mprA VFG0596 Protein 6e-35 42
tcrA YP_006266292.1 response regulator mprA VFG1389 Protein 1e-34 42