Gene Information

Name : tcrA (ACPL_327)
Accession : YP_006263292.1
Strain : Actinoplanes sp. SE50/110
Genome accession: NC_017803
Putative virulence/resistance : Virulence
Product : response regulator mprA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 237453 - 238136 bp
Length : 684 bp
Strand : +
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
GTGGCGGTGCGGGTGTTGGTGGTCGAGGACGAGCCGCGCCTGGCCAGCCTGCTGGCCCGTGGCCTTCGCGAGGCCGGCCA
CGACGCGGACGTACGTCACACCGGCGGTGACGGGCTGCTCGCCGCGACCGGCGGCGACTACGACGCGGTGGTGCTCGACC
TGATGCTGCCGGGCCTCGACGGGCTGGCGGTCTGCCGCAAGCTGCGCGAGCGTGGGATCCGGGTGCCGGTGCTCATGCTC
ACCGCCCGCGGCGAGGTCCCCGACCGCATCGCCGGACTGGACGCCGGCGCCGACGACTACCTGAGCAAGCCGTTCTCCTT
CGACGAACTGCTGGCCCGGCTCCGCGCCCTGCACCGCCGCGCGGCCGACCCGGCCATCGCCGAGCTGGCGGCCGGGGACC
TGCGGCTGGACGCCGCCGCCCGCACGGTATACCGCAGCAGCACCGCCATCGAGCTGTCCGCCCGGGAGTTCGACATCCTC
GCTCTGCTGATGAGCCGGGCCGGGCAGTGCGTCACCCGGTATCAGATCCTCGACGAGGTCTGGGACGGCGAGACTGACCT
GCGCTCCAACGTCATCGACGTCTACATCGCCAGCCTGCGCGGCAAGGTCGACAAACCGTTCGCCCGGCAGGCGATCAGCA
CCGTGCGCGGCGCCGGCTACCGCCTCGAACGTGACGGCGGCTGA

Protein sequence :
MAVRVLVVEDEPRLASLLARGLREAGHDADVRHTGGDGLLAATGGDYDAVVLDLMLPGLDGLAVCRKLRERGIRVPVLML
TARGEVPDRIAGLDAGADDYLSKPFSFDELLARLRALHRRAADPAIAELAAGDLRLDAAARTVYRSSTAIELSAREFDIL
ALLMSRAGQCVTRYQILDEVWDGETDLRSNVIDVYIASLRGKVDKPFARQAISTVRGAGYRLERDGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-28 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-27 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcrA YP_006263292.1 response regulator mprA BAC0125 Protein 3e-34 48
tcrA YP_006263292.1 response regulator mprA BAC0308 Protein 2e-30 48
tcrA YP_006263292.1 response regulator mprA BAC0197 Protein 6e-28 46
tcrA YP_006263292.1 response regulator mprA BAC0083 Protein 3e-30 45
tcrA YP_006263292.1 response regulator mprA BAC0111 Protein 3e-29 44
tcrA YP_006263292.1 response regulator mprA BAC0638 Protein 3e-24 43
tcrA YP_006263292.1 response regulator mprA NC_013450.8614146.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA NC_002951.3238224.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA NC_007793.3914065.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA NC_002758.1121390.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA NC_010079.5776364.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA NC_002952.2859858.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA NC_007622.3794948.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA NC_003923.1003417.p0 Protein 1e-29 42
tcrA YP_006263292.1 response regulator mprA HE999704.1.gene1528. Protein 2e-28 42
tcrA YP_006263292.1 response regulator mprA AE015929.1.gene1106. Protein 4e-25 41
tcrA YP_006263292.1 response regulator mprA AE000516.2.gene3505. Protein 2e-25 41
tcrA YP_006263292.1 response regulator mprA BAC0288 Protein 9e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcrA YP_006263292.1 response regulator mprA VFG0596 Protein 1e-28 47
tcrA YP_006263292.1 response regulator mprA VFG1390 Protein 2e-27 42