Gene Information

Name : kdpB (DGo_CA0648)
Accession : YP_006260033.1
Strain : Deinococcus gobiensis I-0
Genome accession: NC_017790
Putative virulence/resistance : Unknown
Product : Potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 705584 - 707629 bp
Length : 2046 bp
Strand : -
Note : -

DNA sequence :
ATGACCACTGCCCAGCCCCCCAAAGCGCCGAACAGCATCTTCTCCTCGGCCCTGCTCCTGAACGCCCTGCGCGCGTCTTT
CGTCAAGCTCGACCCGCGCGCGATGGCCAAGAATCCCGTGATGTTCGTGGTGCTCGTGGGCGGCGTCCTCACGGCGGTCC
TCACGGTCATGAACCTCGCCTCGGGCCGCTCGTGGGGCTACGAACTGGGCATCACGCTGCTGCTGCTGTTCACGGTGCTG
TTCGCCAACTTCGCCGAGGGGCTGGCCGAGGCGCGCGGCAAGGCCCAGGCCGCGACCCTGCGCTCGGCCCGCGAGGACAC
GCCCGCCCGGCGGCTGGTGAATGGCCAGGAAGAGGTGGTGCCCAGCACCCGCCTCGCCCCCGGCGACCTGATCGTGGTCG
AGGCCGGCGAGATGATCCCCGGCGACGGCGAAGTGGTGGAAGGCCTGGCCTCGGTGGACGAGAGCGCCATCACCGGCGAG
AGCGCGCCGGTGATCCGTGAGGCGGGCACCGACCACAGCGGCGTGACCGGCGGCACGCGGGTGCTGTCCGACCGCATCGT
GGTGCGCGTGACCTCGCAGCCCGGCGAGAGCTTCTTGGACCGCATGATCGCGCTGGTCGAAGGCGCGAGCCGCCAGAAGA
CCCCCAACGAACTGGCCCTGTCCATCCTGCTCGCGGCACTCACGCTGGTGTTCCTGATCGTGGTGGCCACGCTGCTGCCC
CTGTCGCGCTTTGCCGGGGCCGAGGTGAATGTGGTGACGCTCGTGGCGCTGCTCGTATGCCTGATCCCGACGACCATCGG
CGGCCTGCTGCCCGCCATCGGCATCGCGGGAATGGACCGGGCCCTCCAGGCCAACGTGATCGCCAAGAGCGGCAAGGCGG
TCGAGGTCGCGGGCGACGTGGACGTGCTGCTGCTCGACAAGACCGGCACCATCACCATCGGGGACCGGCAGGCGACCCGA
TTCGCGCCGCTGCCCGGCGTGACCGAGGTCGAACTGGCGCGCCTGGCCGCCCTCGCCTCGCTGGCCGACCCGACGCCCGA
AGGCAAGAGCATCGTGGCGCTGGCCCGCAGCCAGGGCGTGACCGTAGAGACGCCGGGCGGCGCGGAGTTCGTGGAATTCA
CCGCCCAGACCCGCATGAGCGGCGTGGACTTCCCGGCCGTGGGCGGCCTGTCGAGCATCCGCAAGGGCGCGTCCGACCGC
ATCGCCCGCCTCGCCGCCGAGCGCGGGGGCCGCGTGCCGCCCGAGCTTCAGCCGCTGGTGGACGAGGTGGCGCGCGGGGG
CGGCACGCCGCTGGTCGTCATCCAGAACGACCGCCTGCTGGGCGTGGTGGCGCTGTCCGACATCGTGAAGCCGGGAATGC
GCGAACGTTTCGAGCAGCTGCGCCGCATGGGCCTGCGCACGGTGATGATCACCGGGGACAACCCCCTGACCGCCGAGGCG
ATCGCCCGCGAGGCCGGCGTGGACGGTTTCCTGGCCGAGGCGACCCCCGAGGACAAGCTGCGCATGATCCGCGAGGAGCA
GCAGGGCGGCAAGCTGGTCGCCATGATGGGCGACGGCACCAACGACGCCCCGGCCCTGGCCCAGGCCGACGTGGGGCTGG
CGATGCAGAGCGGCACCCAGGCCGCCAAGGAAGCCGCCAACATGATCGACCTCGATTCGGACCCCACCAAGCTCATCGAG
GTCGTCGAGATCGGCAAGGGCCTCCTCATGACGCGCGGCGCGCTGACGACCTTCTCCATCGCCAACGACGTGGCGAAGTA
TTTCGCGGTGCTGCCCGCGCTGTTCGCCGCGCAGCTCCCGGCGCTCGCGCCCCTGAACGTGATGGCCCTGCGCAGCCCCG
AAAGCGCCATCCTCTCGGCCGTCATCTTCAACGCGCTCGTCATTCCGGCCCTGATTCCGGTGGCCCTCAAGGGCGTGCGC
TACACCCCCGGCAGCGCCGACGCCCTGCTGGCCCGCAACCTGCTCATCTACGGCCTGGGCGGCGTCCTCGTGCCCTTCGT
CGGCATCAAACTCATCGACCTGGCGCTCGGCGTGCTGGGCTTCTGA

Protein sequence :
MTTAQPPKAPNSIFSSALLLNALRASFVKLDPRAMAKNPVMFVVLVGGVLTAVLTVMNLASGRSWGYELGITLLLLFTVL
FANFAEGLAEARGKAQAATLRSAREDTPARRLVNGQEEVVPSTRLAPGDLIVVEAGEMIPGDGEVVEGLASVDESAITGE
SAPVIREAGTDHSGVTGGTRVLSDRIVVRVTSQPGESFLDRMIALVEGASRQKTPNELALSILLAALTLVFLIVVATLLP
LSRFAGAEVNVVTLVALLVCLIPTTIGGLLPAIGIAGMDRALQANVIAKSGKAVEVAGDVDVLLLDKTGTITIGDRQATR
FAPLPGVTEVELARLAALASLADPTPEGKSIVALARSQGVTVETPGGAEFVEFTAQTRMSGVDFPAVGGLSSIRKGASDR
IARLAAERGGRVPPELQPLVDEVARGGGTPLVVIQNDRLLGVVALSDIVKPGMRERFEQLRRMGLRTVMITGDNPLTAEA
IAREAGVDGFLAEATPEDKLRMIREEQQGGKLVAMMGDGTNDAPALAQADVGLAMQSGTQAAKEAANMIDLDSDPTKLIE
VVEIGKGLLMTRGALTTFSIANDVAKYFAVLPALFAAQLPALAPLNVMALRSPESAILSAVIFNALVIPALIPVALKGVR
YTPGSADALLARNLLIYGLGGVLVPFVGIKLIDLALGVLGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-141 58
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-141 58
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-142 57
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-141 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-141 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-141 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-141 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-141 56