Gene Information

Name : pykF (DGo_CA0004)
Accession : YP_006259389.1
Strain : Deinococcus gobiensis I-0
Genome accession: NC_017790
Putative virulence/resistance : Virulence
Product : Pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4823 - 6271 bp
Length : 1449 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCACTTTGACCGCGCGACCAAGATCGTCGCCACCATCGGCCCCGCGAGCCGCAGCCCCGAAGTCCTGAGCCGCAT
GATGGACATGGGCCTGAATGTCGTGCGCATGAACTTCAGCCACGGCGATCAGGAAGACCACCGCCAGACCTTCCAGATGG
TGCGCGACCTCGCCGCCAAGAAGAACATGCCCATCGGCATCCTGCAGGACCTCCAGGGGCCCAAGATCCGGGTGGCCCGC
TTCGCCGAAGGCAAGGTCACCCTGGCGCAGGGCGACCGGTTCACTATTACGATGGACGACGTCGAGGGCGACCAGACGCG
CGTGGGCAGCACCTACAAGGGCCTGGCCCTGGACGTGCACCCCGGCATGACGCTGCTGCTCGACGACGGCAACATGGCCC
TGAAGGTCGAGGGCGTGCGCGGCAACGACGTGCTGACCACCGTGATGGTCGGCGGCGTCCTGAAGAACAACAAGGGCATC
AACGTGCCCGAAGCCGACCTGTCGGTGCCTGCCCTGTCGGACAAGGACGTGTCGGACATGGAATTCGGCGCGTCGCTGGG
TGTGGACTGGGTGGCGCTGTCGTTCGTGCGCTCGCGCGACGACCTGCTGCTGGCCCGGCACTATCTCGCGCGCTTCGGCT
CGCGTGCCAAGCTGATGGCCAAGATCGAGAAGCCGCAGGCGGTGGACCGCTTCGAGGACATCCTGCGCGAGGTGGACGGC
ATCATGGTGGCGCGCGGCGACCTGGGCGTCGAGATGCGCCCCGAGCAGGTCCCGACCATCCAGAAGCGCATCATCCGCAT
GTGCCGCGAGCAGGGCAAGCCGGTCATCACCGCGACCCAGATGCTCGAGAGCATGATCGGCCTGCCGCGCCCCACCCGCG
CCGAGGCCTCGGACGTGGCGAACGCTATCTACGACGGCACCGACGCCGTGATGCTCTCGGCCGAGTCGGCCGCCGGGCTC
TACCCCGTCGAGTCGGTCGCCATGATGGACCGCATCGCCCGCGAGGCCGAGGGCAGCGAACACTACCAGATGCTCCAGCA
GCAGCAGGTCATCGACACCGAACTGGCGCAGGATTCCATCGCCTTCGCGGCCTGCTCCATCGGCGAGAAGCTCGACGCTC
CGGCCATCGTGACCTTCACGAGCACCGGCGGCGCGGCGGCCCGCATCGCCAAGTACCGCCCGCCCCTGGCGATCCTGGCG
CTGACCCCCAACGAGCAGACCCGCAACCAGCTCACCCTGAGCTGGGGCGTGGTGCCCATGCTCAGCGAGGACCCCAGCGA
CACCGACGACATGGTGCGCATCGCCAACGACGAGCTGAAGAAGAGCGGTCTGGCCGACGTGAAGGACCGCTACGTGATCA
CGGCGGGCGTGCCCTTCGGCGTGCGCGGCACGACCAACATGCTGCGCGTCGAGCGCCTGCGCGAAGACGACTTCGGCGCG
CTGCGCTGA

Protein sequence :
MKHFDRATKIVATIGPASRSPEVLSRMMDMGLNVVRMNFSHGDQEDHRQTFQMVRDLAAKKNMPIGILQDLQGPKIRVAR
FAEGKVTLAQGDRFTITMDDVEGDQTRVGSTYKGLALDVHPGMTLLLDDGNMALKVEGVRGNDVLTTVMVGGVLKNNKGI
NVPEADLSVPALSDKDVSDMEFGASLGVDWVALSFVRSRDDLLLARHYLARFGSRAKLMAKIEKPQAVDRFEDILREVDG
IMVARGDLGVEMRPEQVPTIQKRIIRMCREQGKPVITATQMLESMIGLPRPTRAEASDVANAIYDGTDAVMLSAESAAGL
YPVESVAMMDRIAREAEGSEHYQMLQQQQVIDTELAQDSIAFAACSIGEKLDAPAIVTFTSTGGAAARIAKYRPPLAILA
LTPNEQTRNQLTLSWGVVPMLSEDPSDTDDMVRIANDELKKSGLADVKDRYVITAGVPFGVRGTTNMLRVERLREDDFGA
LR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-78 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-78 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-78 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-78 45
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_006259389.1 Pyruvate kinase VFG0479 Protein 1e-78 45