Gene Information

Name : DGo_CA2781 (DGo_CA2781)
Accession : YP_006262166.1
Strain : Deinococcus gobiensis I-0
Genome accession: NC_017790
Putative virulence/resistance : Virulence
Product : Type I site-specific deoxyribonuclease chain R
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2952370 - 2955330 bp
Length : 2961 bp
Strand : +
Note : -

DNA sequence :
ATGCCCACCGACACGTCCGAAAAGGCCCTGGAAACCATCCTCGTCGACGCCCTGACCACGCGGGGATGGGTGCCAGGTGA
TCCGCACGATTACGAGCGCGAGTACGCAGTGGACTTGGCGCAGCTCACGGCTTTCCTGGAAGCGACGCAGCCGAAGCTGG
TCGAGGCGCTGGATCTGCGCGCGGCGTCCCCGACGCGCCACAAGTTTCTCTCGCGCCTTCAAGGCGAGATCACGAAACGC
GGTGTGGTGCACGTGCTGCGGCATGGAGTGGCTCATGGCGCGCACCACGTTGACCTGTTCTACGGCACGCCCACGCCCGG
CAACGCCAAGGCGGCGGCGCTGCACACCCTGAACCACTTCAGCGTCACCCGTCAACTGCGGTACAGCCGCAGCGAGACGG
CCTTGGCCCTGGATGTGGGGCTGTTCGTCAACGGTCTGCCGGTCGCTACGATGGAGCTGAAAAACAGCCTGACGAAACAG
ACGGTCGCCGACGCCGTGGAGCAGTACCGACGTGACCGCGATCCTCGCGAACTGCTGTTCGCCATGGGCCGCTGCGTGGC
GCATTTCGCGGTAGACGACGCCGAGGTGCGTTTTTGCACGGAGCTGAAGGGCAAGGCCTCCTGGTTCCTGCCCTTCGATC
GAGGCTGGCAAGAGGGGGCAGGCAATCCCCCGAATCCGAACGGTCTTAAGACTGCGTACTTCTGGGAAGAGATTCTGACC
CCGGCCAGCCTCACGGACATTCTCGAGAATTACGCGCAGGTCGTCGAAGAAGAGCACCCGAAAACCAAGAAGAAGAAGCG
CCGTCAGATCTTTCCCCGTTACCACCAGTTGGACGTGGTGCGCAAGCTGCTTGTGGACGCGCGGGAGCGGGGCGCAGGTC
AGCGCTATCTCATCCAGCACTCGGCCGGCAGCGGAAAATCAAATTCCATCGCATGGTTGGCGCACCAGTTGGTCGGGCTG
GAACAGGCGGGGCAGGCCGTCTTCGATTCGGTGGTGGTGGTGACGGACCGCCGCATTCTGGACAAACAGATTCGGGACAC
CATCCGGCAATTCGCGCAAGTCGGGGCGACGGTGGGGCACGCCACGCATTCCGGCGAACTGCGGCAGTTTCTGGAAAGCG
GAAAGAAGATCATCATCACCACCGTGCAGAAATTTCCGTTCATCCTCGATGAGATTGAGGGGATGGGCAAGGGCCGGACA
TTCGCGATTCTGATCGATGAGGCACATTCCAGTCAGAGTGGTCGCAGCGCCGCCGCGATGAACGAAGCGCTGGCCGGCAG
CGATGACGCGAACGATCAGGAGCTAGAGCCTGAGGACTTGATCAACAGCGTTCTGGAGTGCCGTATGAAAGCCCGCAAGA
TGCTCGGAAACGCCTCTTATTTCGCGTTCACGGCCACGCCGAAAAACAAAACCCTGGAAACCTTCGGGCGGGCTGCCCCG
GCGGGTGAGAAGGTGCCCCACCTACCGTTCCACCTCTACAGCATGAAGCAGGCCATTCAGGAAGGCTTCATCCAAGACGT
GCTCCGGGCCTATACGCCCGTCGAGAGTTACTACCGTCTGGTCAAGACCGTGGACGCAGACCCGGAGTTCGATACGAAGA
AGGCCCAGAAGAAGCTGCGGGCATACGTAGAAGGTCATGAGCACGCCATCCGTCTCAAGGCGGAAATCATGGTCGACCAT
TTCCACGAGCAGGTGCTGGCAATCCAGAAGGTAGGCGGTCAGGCCCGGGCCATGATCGTCACTGGCAGCGTCGCCCGGGC
ACTCGACTATTTTCATGCCGTCAAGGCTTATCTGGAGCAGCGCAAGAGCCCCTATAAGGCCATCGTGGCGTTCTCCGGAG
AACCCGAGTACAAGGGAATCAAAGTCACCGAGGCCAGCCTCAACGGGTTCGCCTCGAACGACATCCCCGACAAGATCCAG
GAAGAGCCCTACCGCTTCCTGATCTGCGCGGACAAGTTCCAGACCGGGTACGACGAGCCTCTGCTGCACACCATGTACGT
GGACAAGCCCCTCTCGGGAATTAAAGCGGTGCAGACCCTGTCCCGCTTGAACCGGGCGCATCCGCAAAAGCACGACGTCT
TCGTTTTGGACTTTCAGAACAGCACAGAGGTGATCCGACAGTCTTTCGATGCGTACTACCGCGCGACCCTGCTGAGCGAC
GAGACCGACCCCAACAGACTTCATGACCTCAAAAGCGATCTGGACAGTGCACAGGTGTACTCGCCGGGTCAGGTCGAGAA
CCTGGTCGAGCTGTATCTGGCCGGTGCCGACCGCGACCGTCTGGACCCCATCCTGGACGTCTGCGTGGCCACATACAACG
ACCTCGACGAGGACGCGCAGGTGGCCTTCAAAGGCGGCGCCAAGACATTCGTGCGGACGTACAGTTTCCTGGCGGCCCTG
GTCCCGTATACGACCGCCGCGTGGGAACAGCTGTCCATCTTCCTGACCTTCCTGATCCCCAAGCTGCCCGCACCCAAAGA
GGAGGACTTGGCGCAGGGCATCCTCGACAGTATCGACATGGAGAGCTACCGCGTGGAGAAGCAGACCGTCACGAAGATTC
AGCTTACAGATGCGGACGCCGAGCTCGATCCTGTGCCCGTCATGGCGGGTGGGGCGACTCCGGATCCGGAACTGGAACGG
CTCTCGAACATCGTGAAGATTTTCAACGACCAGTTCGGCAACATCGCGTGGACCGACGCTGACCGCCTGCACAAACTCAT
CACCGAGGAGATTCCCGACCTAGTGGCCCGTGACGCGGCGTATCAGAATGCTCTGAAGAACTCCGACCGGCAGAACGCCC
GGATTGAGCACGACCGCGCCCTGATGCGGGTCCTGATCGGGCTGATGCGGGATAACACCGAGCTGTTCAAGCAGTACTCC
GACAACGGCAGTTTCCAGCGTTGGATGCAGGACACCGTCTTCGACCTGACATACCGCGAGGGCCAGCAGCCGGGCCGCTG
A

Protein sequence :
MPTDTSEKALETILVDALTTRGWVPGDPHDYEREYAVDLAQLTAFLEATQPKLVEALDLRAASPTRHKFLSRLQGEITKR
GVVHVLRHGVAHGAHHVDLFYGTPTPGNAKAAALHTLNHFSVTRQLRYSRSETALALDVGLFVNGLPVATMELKNSLTKQ
TVADAVEQYRRDRDPRELLFAMGRCVAHFAVDDAEVRFCTELKGKASWFLPFDRGWQEGAGNPPNPNGLKTAYFWEEILT
PASLTDILENYAQVVEEEHPKTKKKKRRQIFPRYHQLDVVRKLLVDARERGAGQRYLIQHSAGSGKSNSIAWLAHQLVGL
EQAGQAVFDSVVVVTDRRILDKQIRDTIRQFAQVGATVGHATHSGELRQFLESGKKIIITTVQKFPFILDEIEGMGKGRT
FAILIDEAHSSQSGRSAAAMNEALAGSDDANDQELEPEDLINSVLECRMKARKMLGNASYFAFTATPKNKTLETFGRAAP
AGEKVPHLPFHLYSMKQAIQEGFIQDVLRAYTPVESYYRLVKTVDADPEFDTKKAQKKLRAYVEGHEHAIRLKAEIMVDH
FHEQVLAIQKVGGQARAMIVTGSVARALDYFHAVKAYLEQRKSPYKAIVAFSGEPEYKGIKVTEASLNGFASNDIPDKIQ
EEPYRFLICADKFQTGYDEPLLHTMYVDKPLSGIKAVQTLSRLNRAHPQKHDVFVLDFQNSTEVIRQSFDAYYRATLLSD
ETDPNRLHDLKSDLDSAQVYSPGQVENLVELYLAGADRDRLDPILDVCVATYNDLDEDAQVAFKGGAKTFVRTYSFLAAL
VPYTTAAWEQLSIFLTFLIPKLPAPKEEDLAQGILDSIDMESYRVEKQTVTKIQLTDADAELDPVPVMAGGATPDPELER
LSNIVKIFNDQFGNIAWTDADRLHKLITEEIPDLVARDAAYQNALKNSDRQNARIEHDRALMRVLIGLMRDNTELFKQYS
DNGSFQRWMQDTVFDLTYREGQQPGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 2e-178 41
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 3e-178 41
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 2e-178 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGo_CA2781 YP_006262166.1 Type I site-specific deoxyribonuclease chain R VFG1098 Protein 9e-179 41