Gene Information

Name : phoB (DGo_CA2654)
Accession : YP_006262039.1
Strain : Deinococcus gobiensis I-0
Genome accession: NC_017790
Putative virulence/resistance : Virulence
Product : Two component transcriptional regulator PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2808621 - 2809322 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCCATGTGGTCGTGATCGAAGATGAGGGCACTGTCCGGGACGTGCTGCGCTTTCATCTGGAGCGGGCCGGGCTGCG
CGTCTCGGCCTTCGGCAGTACCCGTGAGGCCCAGGACGCCCTGCCCGGCGCCGACGTGTTGGTCCTCGACTGGATGCTGC
CCGGCGAGAGCGGCCTGGGCTTCTTGCGGCGCCTGCGCGCCGACCAGGAACTGCGGCGGCTGCCGGTCCTGATGCTGACC
GCCCGCGCCGCCGAGGCCGAGCGGGTCGAGGGCCTGGAGACGGGGGCGGACGATTACCTGACCAAGCCCTTCTCGGCGGC
CGAACTCGTGGCCCGCGTGCGCGCCCTGCTGCGCCGCTCGCAGCCCGACGCCCCGCAGACCCTGGGCAACGGCCCCCTGA
ACATCGATCTCGCGGCGGCCGAGGCGCGCATGGACGGCCGGCGCCTGAACCTCACGCGGCGCGAGTTCGACCTGCTGGCG
TTCCTGACCCAGCACGCCGGGCGGGTGTACTCGCGCACCGAACTGCTCGACCGGGTGTGGGGCGCGGACTTCCTGGGCGG
CGAGCGCACGGTGGACCAGCACGTCACGCAGCTCCGGGCGCACCTGGGCGACGATCCGGGCCGCCCCGACTTTCTGGAGA
CGGTGCGCGGCAAGGGCTACCGCATGCGCCCGCGCGGCACCGACCGGGCCGAGTCCGCATGA

Protein sequence : 
MSHVVVIEDEGTVRDVLRFHLERAGLRVSAFGSTREAQDALPGADVLVLDWMLPGESGLGFLRRLRADQELRRLPVLMLT
ARAAEAERVEGLETGADDYLTKPFSAAELVARVRALLRRSQPDAPQTLGNGPLNIDLAAAEARMDGRRLNLTRREFDLLA
FLTQHAGRVYSRTELLDRVWGADFLGGERTVDQHVTQLRAHLGDDPGRPDFLETVRGKGYRMRPRGTDRAESA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-20 42
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_006262039.1 Two component transcriptional regulator PhoB NC_012469.1.7685629. Protein 2e-34 42
phoB YP_006262039.1 Two component transcriptional regulator PhoB CP001918.1.gene5135. Protein 2e-18 42
phoB YP_006262039.1 Two component transcriptional regulator PhoB BAC0347 Protein 1e-19 42
phoB YP_006262039.1 Two component transcriptional regulator PhoB CP000647.1.gene4257. Protein 1e-18 42
phoB YP_006262039.1 Two component transcriptional regulator PhoB BAC0533 Protein 1e-18 42
phoB YP_006262039.1 Two component transcriptional regulator PhoB NC_002952.2859905.p0 Protein 4e-32 41
phoB YP_006262039.1 Two component transcriptional regulator PhoB BAC0197 Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_006262039.1 Two component transcriptional regulator PhoB VFG1389 Protein 3e-26 44
phoB YP_006262039.1 Two component transcriptional regulator PhoB VFG0596 Protein 6e-21 42
phoB YP_006262039.1 Two component transcriptional regulator PhoB VFG1390 Protein 3e-25 41