Gene Information

Name : DGo_CA2430 (DGo_CA2430)
Accession : YP_006261815.1
Strain : Deinococcus gobiensis I-0
Genome accession: NC_017790
Putative virulence/resistance : Virulence
Product : Two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2578700 - 2579377 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
ATGGAACGCAAGCCGCTGGTCCTCGTCATTGAAGATGAAAAAGACATTGCCCGCTTCATAGAACTGGAACTCGCGGCCGA
GGGTTACGCCACCGAGGTGGCCTTCGACGGCGTGACGGGTCTTTCCAAATTCCGCGAAGTCAACCCCGATCTCGTCATCC
TCGACCTCATGCTGCCGGTCCTCGACGGCCTGGAGGTCGCGCGGCGCATCCGCAAGACGAGCAACACGCCCATCATCATC
CTGACGGCCAAGGACGGCATTCAGGACAAGGTCGAGGGCCTGGATTCCGGGGCCGACGACTACCTCATCAAGCCTTTTTC
CATCGAGGAACTGCTGGCCCGCGTGCGCGCGCATCTGCGCCGCGTGAACCCGGCCGTGACCGGCGAGGTGCGTGTGGCCG
ACCTCGTGATGAACCTCGACGGCCGTGAGATCTTCCGGGGTGGTCGGCGCGTGGAGCTGAGCGCCAAGGAATTCGAGCTG
CTCGAACTGCTGGCGCGCAATCCCGGCAAAGTCTTCTCGCGCTTCGAGATCGAGGAGAAGGTCTGGCCCGAATACACCGG
AGGCAGCAATGTCGTGGACGTGTATATCGGCTACCTGCGCCGCAAGCTTGAGGAGGGAGGCGAGCGCCGGCTGATCCATA
CCGTGCGCGGCGTCGGCTACGTGCTGCGCGAGGAGTGA

Protein sequence :
MERKPLVLVIEDEKDIARFIELELAAEGYATEVAFDGVTGLSKFREVNPDLVILDLMLPVLDGLEVARRIRKTSNTPIII
LTAKDGIQDKVEGLDSGADDYLIKPFSIEELLARVRAHLRRVNPAVTGEVRVADLVMNLDGREIFRGGRRVELSAKEFEL
LELLARNPGKVFSRFEIEEKVWPEYTGGSNVVDVYIGYLRRKLEEGGERRLIHTVRGVGYVLREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-28 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 7e-33 48
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family BAC0125 Protein 9e-35 46
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_002758.1121390.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_010079.5776364.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_002952.2859858.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_007622.3794948.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_003923.1003417.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 2e-28 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_013450.8614146.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_002951.3238224.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_007793.3914065.p0 Protein 5e-33 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 1e-27 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family BAC0197 Protein 7e-30 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family BAC0083 Protein 5e-31 43
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family BAC0308 Protein 4e-32 43
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family BAC0638 Protein 1e-22 43
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family BAC0347 Protein 4e-26 41
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family BAC0111 Protein 4e-29 41
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family NC_003923.1003749.p0 Protein 2e-25 41
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family HE999704.1.gene2815. Protein 1e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family VFG1390 Protein 6e-37 50
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family VFG1389 Protein 5e-26 45
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family VFG0596 Protein 3e-28 43
DGo_CA2430 YP_006261815.1 Two component transcriptional regulator, winged helix family VFG1386 Protein 1e-28 42