Gene Information

Name : DGo_CA1534 (DGo_CA1534)
Accession : YP_006260919.1
Strain : Deinococcus gobiensis I-0
Genome accession: NC_017790
Putative virulence/resistance : Virulence
Product : putative Lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1667045 - 1667653 bp
Length : 609 bp
Strand : -
Note : putative ABC transporter, ATP-binding component

DNA sequence : 
GTGCTGGGCGGGGTCACGCTGGAGGTCTGGCCCGGCGAGGTCGTGGCGGTCACGGGACCGTCCGGCAGCGGCAAGAGCAC
CCTGCTGCACCTGCTGGGCGGCCTCGACACCCCGCAGGGCGGTGAGGTGTACTGGGCGGGCGAACGCTGCGACCAGCTCG
GCGTGCAGGAGCGGGCGTCGCGGCGGGCCGGGCGCATCGGGCTGGTGTTCCAGCACCACTATCTCCTCGAGGACCTGACC
GTGCTGCAAAACCTCCTGATCCCGACGCAGCTCAGCGGGCGGGGGGGCACCGAGCGGGCGCGCGAACTGCTCGCGCGGGT
GGGGCTGCTCGACCGCGCCGGCGCGCTGCCGGGCGTGCTGAGCGGCGGCGAGCGCCAGCGCGTGGCCGTGGCCCGCGCCC
TGGCCGCGCAGCCCGCCGCCGTGCTGGCCGACGAACCGACCGGCAGCCTGGACCGCGCCGGGGCCGAGACGGTGGCCGGG
CTGCTCGTGTCGCTGGCCCGCGAACAGGGCGCGGGCGTGCTGCTCGTCACCCACGACGACCGCCTCGCCGCGCGCGCCGA
CCGCACCCTGCACCTGCTCGACGGCCACCTCCAGGGGGGCGGCACCTGA

Protein sequence : 
MLGGVTLEVWPGEVVAVTGPSGSGKSTLLHLLGGLDTPQGGEVYWAGERCDQLGVQERASRRAGRIGLVFQHHYLLEDLT
VLQNLLIPTQLSGRGGTERARELLARVGLLDRAGALPGVLSGGERQRVAVARALAAQPAAVLADEPTGSLDRAGAETVAG
LLVSLAREQGAGVLLVTHDDRLAARADRTLHLLDGHLQGGGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-17 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-17 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-17 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-17 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGo_CA1534 YP_006260919.1 putative Lipoprotein-releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 4e-16 48
DGo_CA1534 YP_006260919.1 putative Lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 5e-27 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGo_CA1534 YP_006260919.1 putative Lipoprotein-releasing system ATP-binding protein lolD VFG2059 Protein 4e-10 41