Gene Information

Name : Solca_0574 (Solca_0574)
Accession : YP_006254880.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Resistance
Product : beta-lactamase class A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 685576 - 686481 bp
Length : 906 bp
Strand : +
Note : PFAM: Beta-lactamase

DNA sequence :
ATGAAAAATAGTAAGCTTAATAAAATCCTGATTACATTCATTATTTCCTTCGTTTTTAATAGTTTATCAGCACAACAACT
GACTTTTAAAGATCAAATTGACCAAATTGCTAAAGAAGCTAAAGGAGATGTAGGGGTGGCATTGTTAAATTTAGAGGCGG
GGGATACATTCTTGTATAATGAAACGATGCATTTTCCAATGCAGAGCGTTTATAAGTTCCCGTTAGCAATGGCCGTGTTA
AGTCAGGTAGATGCCGGAAAGTTAACGATTGATCAAAAATTGCATTTAACTAAAAGGGATCTTTTACCAAATACCTGGAG
TCCATTGAGAGAAAAATACCCTAATGCTAATGCTGATGTTACATTGATGGAAGTGTTGAAGGCCACCGTTTCCGAAAGTG
ATAATAATGGTTGTGATATATTGTTCAGGCTGTTAGGCGGACCGAAGAAAGTTGAAAAGTATATCCATGGAATTGGTGTT
AAGGAAATTGCAATTGCAGCAACTGAAGAAGAAATGCACACAGCCTGGGACGTACAGTTTACCAATTGGTGCACACCCGT
GGCAATGCAACAGTTGTTAAGCACATTTCATAAAGATGATAAATTATCAGAAAAGAGTAAGCAGCTGCTTTGGGACATGA
TGGTTGATTCACCAACCGGAGCAAAAAGAATTAAAGCATTACTGCCAGAAGGAACTGTTGTGGCGCACAAAACCGGAACT
TCGGACACTAATAAAGAGGGCGTTACTGGAGCAATTAATGACGTGGGGATTATTGTATTACCTAATAAGCATCATTTAGC
GATCACTGTATTTGTGGCAAATTCTAAGGCAAGTACTGGTATAATGGAAGAAACCATTGCCAAAATTGCCAAGGCGGCAT
ACGATAATGAGATAAACAAGCAGTAA

Protein sequence :
MKNSKLNKILITFIISFVFNSLSAQQLTFKDQIDQIAKEAKGDVGVALLNLEAGDTFLYNETMHFPMQSVYKFPLAMAVL
SQVDAGKLTIDQKLHLTKRDLLPNTWSPLREKYPNANADVTLMEVLKATVSESDNNGCDILFRLLGGPKKVEKYIHGIGV
KEIAIAATEEEMHTAWDVQFTNWCTPVAMQQLLSTFHKDDKLSEKSKQLLWDMMVDSPTGAKRIKALLPEGTVVAHKTGT
SDTNKEGVTGAINDVGIIVLPNKHHLAITVFVANSKASTGIMEETIAKIAKAAYDNEINKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bla VEB-1 CAJ77043.1 Betalactamase Not tested AbaR1 Protein 3e-60 45
ABK1_0262 YP_005512834.1 Extended-spectrum beta-lactamase PER-1 precursor Not tested AbaR4d Protein 4e-54 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Solca_0574 YP_006254880.1 beta-lactamase class A NC_010410.6002875.p0 Protein 2e-60 45
Solca_0574 YP_006254880.1 beta-lactamase class A AY536519.1.gene1.p01 Protein 4e-61 45
Solca_0574 YP_006254880.1 beta-lactamase class A AF010416.1.gene1.p01 Protein 2e-60 45
Solca_0574 YP_006254880.1 beta-lactamase class A AY027870.1.gene1.p01 Protein 2e-60 45
Solca_0574 YP_006254880.1 beta-lactamase class A EF136375.1.gene1.p01 Protein 4e-60 45
Solca_0574 YP_006254880.1 beta-lactamase class A X93314.gene.p01 Protein 4e-51 45
Solca_0574 YP_006254880.1 beta-lactamase class A GQ396303.1.gene1.p01 Protein 2e-51 45
Solca_0574 YP_006254880.1 beta-lactamase class A EF420108.1.gene1.p01 Protein 5e-59 44
Solca_0574 YP_006254880.1 beta-lactamase class A AY740681.1.gene9.p01 Protein 4e-54 44
Solca_0574 YP_006254880.1 beta-lactamase class A FJ627180.1.gene1.p01 Protein 3e-54 44