Gene Information

Name : Solca_0461 (Solca_0461)
Accession : YP_006254769.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Resistance
Product : cation/cationic drug transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 566931 - 567260 bp
Length : 330 bp
Strand : +
Note : PFAM: Small Multidrug Resistance protein

DNA sequence :
ATGAAATATGTATACCTGCTGTTAGCTATATTATTTGAAATTATAGGCACATCTGCATTGCAAGCTTCGGCACAATTCAC
CAAATGGAAACCTTCATTATTGGTGGTTTTGGGGTATGCCTCGGCATTTTTCTTTTTGAGCCTGAGTTTAAGGAGTCTGC
AATTAGGAGTTGCCTATGCAATATGGTCGGGAGTGGGAATCGTAATAATTATACTTGCAGGTATTTTTCTGTTTAAGCAA
ATCCCTGATACACCAGCTATTATTGGGATGGCTTTAATTGTAATAGGAGTAGTAGTGATCAATTTGTTTTCGAAAACAAC
ATCACACTAA

Protein sequence :
MKYVYLLLAILFEIIGTSALQASAQFTKWKPSLLVVLGYASAFFFLSLSLRSLQLGVAYAIWSGVGIVIIILAGIFLFKQ
IPDTPAIIGMALIVIGVVVINLFSKTTSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 3e-04 49
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-04 49
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 5e-04 49
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-04 49
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 5e-04 49
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-04 49
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 5e-04 49
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 3e-04 49
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 3e-04 49
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 5e-04 49
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 3e-04 49
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 3e-04 49
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-04 49
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 3e-04 49
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 3e-04 49
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 3e-04 49
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 3e-04 49
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 3e-04 49
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 3e-04 49
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 5e-04 49
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 2e-06 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0377 Protein 2e-12 54
Solca_0461 YP_006254769.1 cation/cationic drug transporter NC_010410.6003348.p0 Protein 8e-10 53
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0002 Protein 8e-10 53
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0322 Protein 4e-09 52
Solca_0461 YP_006254769.1 cation/cationic drug transporter CP004022.1.gene1549. Protein 8e-12 52
Solca_0461 YP_006254769.1 cation/cationic drug transporter CP001138.1.gene1489. Protein 9e-10 50
Solca_0461 YP_006254769.1 cation/cationic drug transporter NC_002695.1.913273.p Protein 3e-07 49
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0150 Protein 3e-07 49
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0323 Protein 1e-04 49
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0324 Protein 3e-07 47
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0192 Protein 1e-04 46
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0139 Protein 8e-08 45
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0325 Protein 2e-04 43
Solca_0461 YP_006254769.1 cation/cationic drug transporter BAC0140 Protein 0.005 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Solca_0461 YP_006254769.1 cation/cationic drug transporter VFG1586 Protein 7e-07 41