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Name : Solca_4312 (Solca_4312) Accession : YP_006258478.1 Strain : Solitalea canadensis DSM 3403 Genome accession: NC_017770 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 5000619 - 5001911 bp Length : 1293 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGGATAATGATAAATTAAAAATTGCAATAGTAGGATTAGGATATGTTGGACTGCCATTAGCTATTGAGTTTGCAAAAAA ATATTCGGTGTTAGGTTATGACATCAATCAAACTAGGGTAGAAGAGTTAAGTAATGGAATAGATCGCACTCTGGAAGCTA ATATTGAAGATTTGAATGAAACTATATTGAAAGGTAAAACTTCTCATGTTGGTATCAAATTTTCCAGTAATATAGATGAT CTTAAGTCTAACAATATTTATATTCTTACTGTACCTACACCAATTGATCAGTTTAATGCACCTGATTTAGAACCTTTGTT AAAGGCATCTTCAATGGTGGGTAAAATTCTAAAGAGGGGAGATATTGTAATATATGAATCAACCGTTTACCCAGGATGCA CTGAAGAAGATTGTGTTCCTGTACTAGAAAAAGAGAGTGGGTTAATCTATAATGTAGACTTTTATTGTGGCTACTCGCCT GAGAGAATTAATCCTGGAGATAAAATAAATACATTAACAAAAATTAAGAAAGTAACATCAGGTTCAACTGCTGAAATTGC TAATAAAGTTGATGATTTATATGGTTCAATTATAACCGTCGGAACTCATAAAGCAGCATCTATTAAAGTTGCAGAAGCTT CAAAAGCAATTGAAAATGCACAAAGAGATGTTAATATTTCATTTGTTAATGAACTTTCTTTAATATTTGATCGTATTGGC ATTGATACCAATGATGTTATAGAGGCAGCAGGGACTAAGTGGAATTTCCTTAAATATAAGCCGGGGTTGGTGGGAGGACA TTGTATTGGGGTTGATCCTTATTATTTAGCACATAAAGCACAACAATTAGGTTATCATCCACAGGTAATTTTATCAGGTC GTCGAGTTAATAATATGATGGGACAGTTTGTTGCCAACAAGGTAATTAAATTGATGATTGAAAAAGACCACAAAATAAAA GGCTCAAAAGCTTTGATTATGGGTATTACCTTTAAGGAAAACTGTCCGGATGTACGAAATACAAAAGTCGTTGATATTTA TAATGAACTAGTTCAATATGGTTTGAGTGTAGATATTTACGATCCATGGGCTGATAAAGAAGAGGTGAAGCATGAGTATG GACTGCAGATAAACAATGAGCTTGATAATGATATTAACTATCAAGCTATTGTTGTAGCAGTTGCTCATGATGAATTTAAA ACTGTGTGTTTTAAAAGGTTTAAAGATCAAAATGCAGTTATCTTTGATACAAAAGCTTTTTTAGATCGAGAATTGGTTGA TGCACGCTTATAA Protein sequence : MDNDKLKIAIVGLGYVGLPLAIEFAKKYSVLGYDINQTRVEELSNGIDRTLEANIEDLNETILKGKTSHVGIKFSSNIDD LKSNNIYILTVPTPIDQFNAPDLEPLLKASSMVGKILKRGDIVIYESTVYPGCTEEDCVPVLEKESGLIYNVDFYCGYSP ERINPGDKINTLTKIKKVTSGSTAEIANKVDDLYGSIITVGTHKAASIKVAEASKAIENAQRDVNISFVNELSLIFDRIG IDTNDVIEAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKAQQLGYHPQVILSGRRVNNMMGQFVANKVIKLMIEKDHKIK GSKALIMGITFKENCPDVRNTKVVDIYNELVQYGLSVDIYDPWADKEEVKHEYGLQINNELDNDINYQAIVVAVAHDEFK TVCFKRFKDQNAVIFDTKAFLDRELVDARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-117 | 57 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-117 | 57 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-105 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Solca_4312 | YP_006258478.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-117 | 57 |
