Gene Information

Name : Solca_3776 (Solca_3776)
Accession : YP_006257952.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4415597 - 4417639 bp
Length : 2043 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGAAAAAATCTAGAAATATTCCATTGTTTGAAGCAACGCTTGTAAAAGAAGGCATTAAACAAGCGTTCGTCAAACTAAA
CCCCAAAACAATGTTCCGTAATCCGGTGATGTTTACCGTTGAACTTGGAACAGTTGTTATGCTTTTTGTGACTGTTTACT
CCTTAAGCAATACTTCTCAAGGTTCGTTTTTATACAACCTTTCAATTTTTATCATTTTGTTCTTAACCGTGCTGTTCGCA
AATTTTGCAGAAGCATTAGCAGAAGCACGTGGAAAAGCACAGGCAGATACATTAAGAAAAACCCGTGAAGAAACACCAGC
GCGTCTGATTAAAAAATCCACCGATTCTTTAATTCAGGCAGAGCAAATAGTTTCCTCATCACAACTCAAAAAAGGGGATG
TTTTTATTTGCGAAGCTGGCGACGTCATTCCTACAGATGGTGAAATTATGGAAGGTTTGGCTACCATTGATGAATCGGCA
ATAACTGGTGAATCTGCACCGGTAATTCGCGAAGCCGGGGGAGATAAATCTTCGGTAACAGGAGGAACAAAGGTATTATC
AGATAAGATTATTGTGAGAGTTACCACCGAACCAGGCGAAAGCTTCCTTGATAAGATGATCGCCTTGGTGGAAGGGGCGT
CTCGTCAGAAAACACCGAATGAAATCGCATTGACCATTCTGTTGGCCAGCTTCACATTGGTGTTCGTAATTGTATGTATT
ACGCTAAAACCATTTGCAGATTATGCAAACACGCCAATTACCATTGCAGCATTAATTTCATTATTTGTTTGTCTGATTCC
AACCACTATTGGAGGATTGCTTTCTGCCATTGGAATTGCAGGAATGGATCGAGCATTACGCGCCAATGTGATCACGAAAT
CGGGAAAGGCTGTTGAAACTGCAGGCGATATTGACACGTTATTATTGGACAAGACCGGTACGATTACGATTGGTAATCGT
AAGGCAACGAATTTCTGGCCAATAAATGGAACTGATCGTAATTTATTAGTAGAAACGAGTGTTTTAAGCTCCTTAGCCGA
CGAAACACCCGAAGGTAAATCGATCATTGAATTGGCAGGAATTAATATTGCTACTCTTAAACCTACTCATGCCGAATACA
TTGGCTTTACAGCAGAAACTCGTTGCAGCGGTGTAAATATTGGTGATGATCGGAGGATCCGCAAAGGCGCTTTTGATGCT
ATCAGAAACTTAGTTACAGCAGCGGGTAATAATATGCCAGTTGAAGCTGAAAATAGGGTAAAAGAGATTGCTTCCAAAGG
GGGCACTCCGTTGGTTGTTTCGCAAAACGAGCATGTTATGGGGGTTGTTGAATTGCAGGACATTATTAAGCCAGGTATTT
CAGAACGTTTTGAGCGTCTTCGCAAAATGGGTGTTAAAACCGTTATGGTTACAGGTGACAACCCATTAACCGCTAAGTTT
ATTGCAGAGAAAGCCGGCGTCGATGATTTCATCGCAGAAGCTAAACCTGAAGATAAAATGAATTACATCAAAGCTGAGCA
AAACCAAGGAAAACTGGTAGCAATGATGGGAGATGGAACCAATGACGCACCGGCTCTTGCCCAAGCAGATGTGGGAGTTG
CAATGAACAGCGGAACCCAAGCCGCAAAAGAAGCCGGAAACATGGTAGACCTCGACAATGACCCCACCAAGCTAATCGAG
ATCGTTGAAATTGGTAAACAATTACTAATGACTCGTGGTACGCTTACTACCTTTTCCATTGCCAATGACGTGGCAAAATA
TTTTGCCATAGTACCAGCCCTGTTTATGGCTTCAATTCCAGCATTGCAAGGATTAAATATCATGAAGCTAACCAGTCCTG
AAACAGCCCTCTTATCAGCGGTTATTTTCAACGCAATCATTATCCCGTTGTTAATTCCATTGGCATTAAAAGGAGTTGCG
TACAAACCAATTGGAGCAAGCAAATTACTACGACGCAATCTATTGATCTATGGTTTGGGTGGTATAATAGCCCCTTTTAT
CGGCATAAAATTGATCGATGTTTTGTTAACAATGTTTATGTAA

Protein sequence :
MKKSRNIPLFEATLVKEGIKQAFVKLNPKTMFRNPVMFTVELGTVVMLFVTVYSLSNTSQGSFLYNLSIFIILFLTVLFA
NFAEALAEARGKAQADTLRKTREETPARLIKKSTDSLIQAEQIVSSSQLKKGDVFICEAGDVIPTDGEIMEGLATIDESA
ITGESAPVIREAGGDKSSVTGGTKVLSDKIIVRVTTEPGESFLDKMIALVEGASRQKTPNEIALTILLASFTLVFVIVCI
TLKPFADYANTPITIAALISLFVCLIPTTIGGLLSAIGIAGMDRALRANVITKSGKAVETAGDIDTLLLDKTGTITIGNR
KATNFWPINGTDRNLLVETSVLSSLADETPEGKSIIELAGINIATLKPTHAEYIGFTAETRCSGVNIGDDRRIRKGAFDA
IRNLVTAAGNNMPVEAENRVKEIASKGGTPLVVSQNEHVMGVVELQDIIKPGISERFERLRKMGVKTVMVTGDNPLTAKF
IAEKAGVDDFIAEAKPEDKMNYIKAEQNQGKLVAMMGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDNDPTKLIE
IVEIGKQLLMTRGTLTTFSIANDVAKYFAIVPALFMASIPALQGLNIMKLTSPETALLSAVIFNAIIIPLLIPLALKGVA
YKPIGASKLLRRNLLIYGLGGIIAPFIGIKLIDVLLTMFM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-149 58
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 9e-149 57
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-148 57
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-148 57
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-148 57
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-148 57
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-149 57
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-149 57