Gene Information

Name : Solca_3643 (Solca_3643)
Accession : YP_006257823.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4255276 - 4256772 bp
Length : 1497 bp
Strand : +
Note : PFAM: Catalase; Catalase-related immune-responsive

DNA sequence :
ATGGAAGAAAAAAAGAAATTAACCACTGCATCGGGTCGACCGTTTGTCGAAAATGAAAACACCCAAACCGTTGGTCCACG
CGGTCCGATTTTAATCCAGGATTTCATCTTACATGAGAAAATGGCGCATTTTAATCGTGAGCGTATACCGGAGCGTGTAG
TGCACGCCAAAGGCTCGGGCGCCTATGGCACTTTTACAGTTACTAATGATATTTCTAAATACACAAAAGCTAAAGTTTTC
AATGGCATTGGAAAACAAACCAAAGTATTTCTCCGCTTCTCAACCGTTGGAGGCGAGAAAGGATCGGCAGATACTGAACG
AGATCCACGCGGATTTGCACTTAAATTTTATACCGAAGATGGCAACTACGACTTGGTTGGAAACAATACTCCAGTATTTT
TCATAAAGGATCCCAAAAAGTTTGGTGACTTTATCCATACACAAAAGCGTGATCCGTTTACCAACTGCAAAAGCGCTACT
ATGATGTGGGATTTCTGGTCGCTGAATCCGGAGAGCTTACATCAGGTATTAATCCTAATGTCTGATCGTGGCACTCCTTA
TGGTTATCGCCACATGGATGGATTTGGGAGCCATACATTCTCTTTTATCAATAAAGACAATGAACGTTTTTGGGTAAAAT
TTCACTTTAAAACGGAGCAGGGTATTAAAAACTTCATCAATGATGAAGCCGTGAAGATGAAAGGTGAAGATCCGGATTTT
GCCCAGCGAGACTTGGTTCATGCAATTGAAAATGGCGATTTTCCAAAATGGAAATTGAAGATTCAGATCATGACTCAGGA
ACAGGCAAAGACATTCCGTTGGAATCCATTTGACTTGACCAAGGTTTGGCCTCATGGCGACTATCCGTTAATTGAGGTTG
GAGTACTGGAACTTAACCAAAACCCAGATAACTATTTTGCCCACGTAGAGCAATCAGCATTTGCTCCTGCACATGTGGTC
GACGGAATTAGTTATTCTCCGGATAAAATGTTGCAGGGCCGTATTCTATCCTATCCGGATGCCCATCGTTATCGTTTAGG
AACCAATTACGAGCAGTTGCCTGTCAATCGTTGTCCGTTTGCAGTGAACAATTACCAACGTGACGGTTCTATGCGTGTGG
ATGGAAACGGAGGAGGTGCTCCTAACTATTTCCCTAATAGCTTTGATAACATTGTTGCTGATCCAAGTTATAAAGAACCT
GCTTGGGAGTTGGAATCTAACGTTGCCGACTGGTACGATCGTAACGCCCCTGGCGATGATGATCATTTCACTCAACCAGG
AAATCTGTTCCGTTTGATGACGGACGAAGCTAAGAAAAATACCATTAGCAATATTGTTGGCGCCATGAGTGGCATTGACG
GTCCAAAACGATTGGACATCATTAACCGTCAGCTTTGTCATTGGTTCCGTGCCGACCCACAATTAGGTGCAGGTATAGCA
ATCGGCTTAGGTGTTGATGTTTCAGCGATGATGCCTAAAACAGAAGCAAGTAATTAG

Protein sequence :
MEEKKKLTTASGRPFVENENTQTVGPRGPILIQDFILHEKMAHFNRERIPERVVHAKGSGAYGTFTVTNDISKYTKAKVF
NGIGKQTKVFLRFSTVGGEKGSADTERDPRGFALKFYTEDGNYDLVGNNTPVFFIKDPKKFGDFIHTQKRDPFTNCKSAT
MMWDFWSLNPESLHQVLILMSDRGTPYGYRHMDGFGSHTFSFINKDNERFWVKFHFKTEQGIKNFINDEAVKMKGEDPDF
AQRDLVHAIENGDFPKWKLKIQIMTQEQAKTFRWNPFDLTKVWPHGDYPLIEVGVLELNQNPDNYFAHVEQSAFAPAHVV
DGISYSPDKMLQGRILSYPDAHRYRLGTNYEQLPVNRCPFAVNNYQRDGSMRVDGNGGGAPNYFPNSFDNIVADPSYKEP
AWELESNVADWYDRNAPGDDDHFTQPGNLFRLMTDEAKKNTISNIVGAMSGIDGPKRLDIINRQLCHWFRADPQLGAGIA
IGLGVDVSAMMPKTEASN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 5e-128 58
katA YP_005126717.1 catalase Not tested Not named Protein 1e-102 49
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 1e-97 46
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 1e-97 46
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 1e-97 46
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 1e-97 46