Gene Information

Name : Solca_3636 (Solca_3636)
Accession : YP_006257816.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4247720 - 4248772 bp
Length : 1053 bp
Strand : +
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein

DNA sequence :
ATGCAAAAGAAAAAATTATCATTTTTGGATAGGTATCTTACTTTGTGGATATTCCTTGCGATGGCCATTGGTGTAACAAT
TGGTCATTTTATGCCTAACACTCCAAACTTTATCAACCGTTTCAACTCGGGGACCACGAATATTCCTATTGCAATTGGGT
TGATCCTAATGATGTACCCTCCATTAGCAAAAGTGAGATATGATAAGCTTCCGGATGTTTTCAAAAACAAGAAAATCCTT
GGTCTTTCATTATTTCAAAATTGGGTAATTGGTCCGGTCCTGATGTTTATTCTCGCAGTCATCTTTTTAAGAGACTATCC
TGAATACATGATTGGATTAATAATGATCGGCATTGCCCGTTGTATCGCAATGGTAATTGTATGGAATGATCTGGCTGGGG
GCGATCGAGAATATGTAGCCGGACTGGTGGCTTTTAACAGTATTTTCCAAGTTTTGTTCTACAGCTTATTTGCTTGGATA
TTCGTCACTAAACTTCCGGCATTAGTTGGTGTACAAACTGCAATTATTGATATAAAAATTGCACAAATTGCTGAAAGTGT
TTTTATCTATCTGGGAATTCCATTCATCGCCGGATTTCTTTCCAGAACCTTTTTAATGAAACTAAAAGGCAAAGAGTGGT
ATGAACATACTTTTCTTCCTGCAATCAGTCCGATTACACTGATAGCTTTATTATTTACCATAACGATCATGTTTAGTTTA
AAAGGCGAACTTATTGTCAAGATTCCTGGCGATGTGTTCCGAATTGCTCTCCCCCTTTTACTATACTTTGGAATTATGTT
TTTCTCCGCATTCTTCCTTTCCAAAAAAGCCGGAGCCGACTATGCCAAGTCCACTTCTTTAGCTTTTACCGCTGCCGGCA
ACAATTTCGAACTCGGTATCGCTGTAGCCATTGCAGTATTTGGCATAAACTCAGGAGTTGCCTTTGCTGCTGTAATAGGC
CCGCTGATAGAAGTCCCGGCCTTAATCCTATTAGTCAACTTTGCATTAAAACAACAACATAAATTCGAAAAAGCTACAAC
AAAACTAAGATGA

Protein sequence :
MQKKKLSFLDRYLTLWIFLAMAIGVTIGHFMPNTPNFINRFNSGTTNIPIAIGLILMMYPPLAKVRYDKLPDVFKNKKIL
GLSLFQNWVIGPVLMFILAVIFLRDYPEYMIGLIMIGIARCIAMVIVWNDLAGGDREYVAGLVAFNSIFQVLFYSLFAWI
FVTKLPALVGVQTAIIDIKIAQIAESVFIYLGIPFIAGFLSRTFLMKLKGKEWYEHTFLPAISPITLIALLFTITIMFSL
KGELIVKIPGDVFRIALPLLLYFGIMFFSAFFLSKKAGADYAKSTSLAFTAAGNNFELGIAVAIAVFGINSGVAFAAVIG
PLIEVPALILLVNFALKQQHKFEKATTKLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 8e-99 62
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 1e-98 62
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 5e-75 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Solca_3636 YP_006257816.1 arsenical-resistance protein BAC0573 Protein 2e-102 67
Solca_3636 YP_006257816.1 arsenical-resistance protein BAC0004 Protein 2e-80 55