Gene Information

Name : Solca_2966 (Solca_2966)
Accession : YP_006257161.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3509001 - 3509474 bp
Length : 474 bp
Strand : +
Note : PFAM: Predicted SPOUT methyltransferase

DNA sequence :
ATGAAAATAACCCTTATCCAGATAGGTAAAACCGAAGACAAGTATTTATTGGAAGGTATTGATAAATATGAAAAACGCCT
GAAACATTATATTAACTTTTCCACAGTTACTATCCCTGCTCTAAAGAACACCAAGAATCTGAATTTTGAAGAACAGAAAA
AGAAAGAAGCTGAATTGATTCTAAAGAGTATTAACAATACGGATTATGTAATCTTATTGGATGAAAAAGGTAAAGTATTT
ACTTCTGTCCAATTCGCCGACCAATTAAATAAGCACATGAACAGAGCTGTTCAAAATCTCGTATTTATAATTGGGGGACC
ATACGGGTTTGATGAAAAAATATATGCCCGTGCAAATGAAAAATTAAGTTTATCCACAATGACTTTTTCGCATCAAATGG
TTCGTTTGTTCTTTATAGAACAAATATATAGGGCAAACACCATTTTAAAAGGAGAACCTTATCATCACGAATAA

Protein sequence :
MKITLIQIGKTEDKYLLEGIDKYEKRLKHYINFSTVTIPALKNTKNLNFEEQKKKEAELILKSINNTDYVILLDEKGKVF
TSVQFADQLNKHMNRAVQNLVFIIGGPYGFDEKIYARANEKLSLSTMTFSHQMVRLFFIEQIYRANTILKGEPYHHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-27 41
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-27 41
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-27 41
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-27 41
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-27 41
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-27 41
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 3e-27 41
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-27 41
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-27 41
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-27 41
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-27 41
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-27 41
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-27 41