|
Name : Solca_2616 (Solca_2616) Accession : YP_006256826.1 Strain : Solitalea canadensis DSM 3403 Genome accession: NC_017770 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : - COG ID : - EC number : - Position : 3096969 - 3099254 bp Length : 2286 bp Strand : - Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain DNA sequence : ATGTCAGAACAAAACTATTTTCTGAAGATTGCCCACGATTTGGGTATTGGTAGTAAGCAGGTAGAAGCAACAGTTGCGCT GTTGAATGAAGGTGCTACCATTCCGTTTATTTCTCGTTATCGTAAAGAATTAACAGGCAGTTTGGATGAGGTTGCCATTG GTGCTATACGCGATGAGATAGAGCGTTTGAGAGAACTTGATAAACGCCGGGAAACTATCCTGAATTCTATCCGTGAGCAA GGAAAGCTGACTGATGAATTGGAAAAAGATATTCTTTCTGCTGAAACTATGAGCAGATTGGAAGACCTTTATCTTCCTTA TAAACCTAAGCGCCGAACCAAAGCAACGATTGCACGTGAACGTGGTTTAGAGCCACTAGCGCAATTGATCTTTGCCCAGG ATACCAAAGATATCGACACTGAGGCAACAAAATTTGTTGATGCTGAAAAAGAAGTCAATAGTGAAAGCGAAGCATTACAA GGTGCACGTGATATTATTGCTGAGTGGATCAATGAGGATGCTGTTTGTCGTGATAAAATGCGTGTTTTATATACAGATAA AGCTGTTATCACTTCATCGGTAATGAAAGGAAAAGAAGAAGAAGGTGCTAAGTACCGTGATTATTTTGAATGGTCTGAAC AACTGAAAAATATTCCTTCACACCGTTTACTGGCATTACGTCGTGGTGAAAAAGAAATGATCCTGAGTCTTGATATCGCT CCTGAAAAAGAAGACGCTATCAATATTATAGAAAACCAATTTGTGAAGAGCAGAGGAGATGCTGCCGAACAAATTAAAAT TGCAATTGACGATTGTTATAAACGTTTATTGTCACCATCTATTGAAACAGAAATGCGTCTGTTAACCAAAAAAGGTGCAG ATGAGAAAGCCATTGTTGTTTTTGCGGATAACCTACGTGAGTTGTTGTTAGCATCGCCAATGGGTCAAAAAAGCATTCTG GCAATCGATCCGGGATTCCGTACTGGTTGTAAAGTGGTGGTGTTAAATCCACAGGGTAAATTATTGGAGAATACAGTTAT TTATCCTACTGCTTCATCGGCTGCTAAGATTGTGGAGGCTGAGGCTGTTGTACTTGCACTTTGCCAGCGTTTCAAAATTG AAGCAATTGCCATTGGTAACGGTACGGCAAGTCGTGAGACAGAAGCTTTTGTAAATGGTATTAAAGATCTTCCGAAAGCT ATTACTGTCGTAATGGTGAATGAAGCAGGTGCCTCTGTTTATTCAGCGTCAGAGGTTGCGCGTGAAGAATTCCCCGACTA TGATGTAACTGTTCGTGGTGCAGTTTCTATTGGCCGTCGCTTGGCTGACCCATTAGCCGAATTAGTAAAGATCGATCCTA AATCAATCGGTGTCGGGCAATATCAGCATGATGTTGATCAGGCTGCTTTGAAAAATAAATTAGATGAAGTTGTAGCTTCA TGTGTGAATGCCGTAGGGGTTGAAGTGAATACAGCAAGTAAACAATTGTTGACTTATGTATCAGGTTTAGGTCCGGCATT GGCACAAAATATCATCAATTACCGTAATGAAAAAGGAGCATTTAAAACCCGTAAGGATTTGATGGATGTTCCGAGAATGG GCGAGAAGGTGTTTGAGCAGGCGGCAGGTTTCTTGCGCATTCTGAATGGAGAACACCCTTTAGATTCAAGTTCTGTTCAC CCTGAATCCTATCATATTGTAGAAAAAATGGCTGCAGATCATAACTGTAAAGTGGAAGATTTGTTATCCAATCGTGATTT GCGTAAGAAGATCGATCTGAAACAATATGTTAGTGAAAAAGTTGGTTTGCCTACCTTAAATGATATTATTCAGGAATTGG ATAAACCAGGTCGCGACCCTCGTAAAGAGTTTGAAGCATTTAAGTTTGCTGATGATGTAAACGAAATTGCTGACTTGAAA ATCGGTATGCGTTTACCAGGTATTGTAACCAACGTAACCAACTTTGGCGCCTTTGTCGATATTGGAGTTCATCAGGATGG TTTAGTGCATTTAAGTCAACTTTCAAACCGTTTTATCACAGATGCAAATGAAGTGGTAAAAGTGGCTCAGAAAGTTTGGG TAACAGTTACTGATGTGGATGTAGACAGAAAACGTATCGCACTAACGATGAAGGATGAAAGTGCACCGGTTCAGCGAACA AAAGCTGAAAAGGAAAAGATGCGTAACGATAGAGCCATCAAACCTTCGCAAAGTAAACCTAAAGAAAAAGAAGAACCTCA GGATATGAATTCGATGCTAGCTGCATTGAAAAATAAATGGAAGTAG Protein sequence : MSEQNYFLKIAHDLGIGSKQVEATVALLNEGATIPFISRYRKELTGSLDEVAIGAIRDEIERLRELDKRRETILNSIREQ GKLTDELEKDILSAETMSRLEDLYLPYKPKRRTKATIARERGLEPLAQLIFAQDTKDIDTEATKFVDAEKEVNSESEALQ GARDIIAEWINEDAVCRDKMRVLYTDKAVITSSVMKGKEEEGAKYRDYFEWSEQLKNIPSHRLLALRRGEKEMILSLDIA PEKEDAINIIENQFVKSRGDAAEQIKIAIDDCYKRLLSPSIETEMRLLTKKGADEKAIVVFADNLRELLLASPMGQKSIL AIDPGFRTGCKVVVLNPQGKLLENTVIYPTASSAAKIVEAEAVVLALCQRFKIEAIAIGNGTASRETEAFVNGIKDLPKA ITVVMVNEAGASVYSASEVAREEFPDYDVTVRGAVSIGRRLADPLAELVKIDPKSIGVGQYQHDVDQAALKNKLDEVVAS CVNAVGVEVNTASKQLLTYVSGLGPALAQNIINYRNEKGAFKTRKDLMDVPRMGEKVFEQAAGFLRILNGEHPLDSSSVH PESYHIVEKMAADHNCKVEDLLSNRDLRKKIDLKQYVSEKVGLPTLNDIIQELDKPGRDPRKEFEAFKFADDVNEIADLK IGMRLPGIVTNVTNFGAFVDIGVHQDGLVHLSQLSNRFITDANEVVKVAQKVWVTVTDVDVDRKRIALTMKDESAPVQRT KAEKEKMRNDRAIKPSQSKPKEKEEPQDMNSMLAALKNKWK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-158 | 47 |
