Gene Information

Name : Solca_2107 (Solca_2107)
Accession : YP_006256337.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2479837 - 2480562 bp
Length : 726 bp
Strand : +
Note : PFAM: Cytidylyltransferase

DNA sequence :
ATGAAATTTTTAGGCATTATTCCATCCCGCTATCAATCCACAAGATTTCCGGGCAAACCATTGGTAGAAATCAAAGGTAA
AAGTATGATCAGACGTGTTTACGAACAATGTAAACTTTGTCAGGAACTTGATGAAGTGGTGGTTGCTACCGATGACCAAC
GCATCTATGATCATGTGATCGCCTTTGGAGGCAAAGCTATGTTGACGTCAGAAGACCACCTAAACGGGACCTCAAGGTGT
GCAGAAGTTGCGGAAGCTTTTCCTGATTATGAGGTGGTCATTAATATTCAGGGCGATGAACCTTTTATCTCTCCAAAACA
AATAAGTGATTTAATTCATTGCTTTGACGATAAAGAAACCGAGTTGGCGAGTATGTATAAGAAAATTAAACAGCCTGAAG
AAGTATTTGACCCACATGTAGCTAAAGTGGTAATGAACTTAAAAGGCGAAGCATTATTCTTTAGTCGCTCACCTATTCCA
TTTTTGCGAAACGTTGCAGAACATGAATGGCTAAACAAACAGGATTATTACTACCATGTTGGTATATACGGCTATAAATC
AGCAGTGTTGTTTCAGCTAATCAACTTAGATCCGTCTCCACTCGAGCTCAGCGAGTCTTTGGAGCAATTACGTTGGCTTG
AGTATGGCTTTAAGATAAAAATGGCGGAAACTGATATTGATACGATTGCAATTGATACTCCCGAGGATCTGGAAAAAATA
AAATGA

Protein sequence :
MKFLGIIPSRYQSTRFPGKPLVEIKGKSMIRRVYEQCKLCQELDEVVVATDDQRIYDHVIAFGGKAMLTSEDHLNGTSRC
AEVAEAFPDYEVVINIQGDEPFISPKQISDLIHCFDDKETELASMYKKIKQPEEVFDPHVAKVVMNLKGEALFFSRSPIP
FLRNVAEHEWLNKQDYYYHVGIYGYKSAVLFQLINLDPSPLELSESLEQLRWLEYGFKIKMAETDIDTIAIDTPEDLEKI
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-34 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-34 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 7e-35 44