Gene Information

Name : Solca_1980 (Solca_1980)
Accession : YP_006256211.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Unknown
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2337910 - 2339055 bp
Length : 1146 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGAAATTCGGTACAAAAGCCATTCATGCAGGTGTTTTCCCTGATCCGTCTACCGGAGCCATCATGACACCAATTTTTCA
AACTTCAACTTACGTGCAGGAAGCTCCTGGAAATCATAAGGGTTATGAATACGCTCGTACACAAAACCCTACACGTGCGC
AGCTTCAAGATAACATTGCTGCTCTTGAAAATGCCAAACATGGTTTTTGTTTTAGTACCGGTATGGGGTCGATTGATACC
TTGATGAAATTGTTTAAACCTGGTGATGAAATCATTTGTACTAACGATTTATACGGAGGTACTTATCGCATTTTTACCAA
AGTTTATCAGAATTACGGATTGAAGTTTCATTTCATTGGGATGGAAGAGGTGGCAAATATTGAAAGCTATATCAATTCAA
ATACAAAAATGATCTGGATTGAAACGCCAACCAATCCTACCTTAAAGATCATTGATATTGCAGGAGCTTCGGCAATTGCT
AAAAAACACCATATTTTATTAGGTGTTGATAACACATTTGCATCGGCTTATTTGCAAAATCCAATGACTTTAGGTGCTGA
TATCGTAATGCACTCGTTGACTAAATACATGTCGGGTCACTCGGATGTGGTTATGGGCGCATTAGTGGTAAATAATGATC
AACTAGCAGAGCAGATTGCATTCTATCAAAATGCTTGTGGAGCTACACCTGGTCCTCAGGATTGTTTCCTTGTTTTAAGA
GGTATTAAAACGCTTCATTTGCGCATGCAGCGTCATTCTGAAAACGGAAAGACCATTGCTCATTACCTAAGAAATCATCC
TAAAGTAGATAAAGTATATTGGCCAGGTTTCGAAGATCATGCCAACCATTCAATAGCAAAACAGCAAATGCGTGATTTTG
GCGGCATGATGTCGTTTTCTCTGAAAGGTGATAAAATGGAAGATGCCATGAAGATTTTAAGCGGTACGCATTTATTCTCA
TTGGCTGAATCATTAGGAGGTGTTGAATCACTGATCGGTCACCCTGCATCAATGACGCATGCTTCTATTCCTCGCGAAGA
GCGCTTAAAAAGCGGTGTTACAGATACACTTATCCGCTTAAGCGTTGGTGTTGAAGATGTGGAAGATCTAATTGAGGATT
TGGAGAAGGCACTGGCGAGTGTTTAG

Protein sequence :
MKFGTKAIHAGVFPDPSTGAIMTPIFQTSTYVQEAPGNHKGYEYARTQNPTRAQLQDNIAALENAKHGFCFSTGMGSIDT
LMKLFKPGDEIICTNDLYGGTYRIFTKVYQNYGLKFHFIGMEEVANIESYINSNTKMIWIETPTNPTLKIIDIAGASAIA
KKHHILLGVDNTFASAYLQNPMTLGADIVMHSLTKYMSGHSDVVMGALVVNNDQLAEQIAFYQNACGATPGPQDCFLVLR
GIKTLHLRMQRHSENGKTIAHYLRNHPKVDKVYWPGFEDHANHSIAKQQMRDFGGMMSFSLKGDKMEDAMKILSGTHLFS
LAESLGGVESLIGHPASMTHASIPREERLKSGVTDTLIRLSVGVEDVEDLIEDLEKALASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-82 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-82 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-59 42