Gene Information

Name : Solca_1971 (Solca_1971)
Accession : YP_006256204.1
Strain : Solitalea canadensis DSM 3403
Genome accession: NC_017770
Putative virulence/resistance : Unknown
Product : type I restriction system adenine methylase HsdM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2330528 - 2332075 bp
Length : 1548 bp
Strand : -
Note : PFAM: N-6 DNA Methylase; HsdM N-terminal domain

DNA sequence :
ATGACAAGCACAATACAAAGAGCAGAATTGCAAGCTAAAATTTGGAAAATAGCCAACGATGTTCGTGGATCAGTTGATGG
ATGGGACTTTAAACAGTTTGTCTTAGGTACTCTTTTCTATCGTTTTATTAGTGAAAACTTTACCAACTACATTGAAGGTG
GTGATGATAGCGTTGACTATGCAAGCTTATCGGATAGTGTAATTACACCCGAAATAAAAGATGATGCCATTAAAACGAAA
GGTTACTTCATTTATCCCAGTCAGCTTTTTGTAAATGTGGCTGAAAAAGCCAATACCAATACCAATCTTAACACCGACTT
AAAAGCGATTTTTGACGCTATTGAAAGTTCCGCAAATGGTTACGCATCTGAACCAGATATAAAAGGATTATTTGCCGATT
TTGACACCACAAGCACAAGACTTGGAAATACCGTTGAAAGTAAGAACGCTCGCTTGGCTGCTGTTTTGAAAGGTGTTGAA
GAATTGAATTTTGGGAAATTTGAAGATAACCATATTGACCTTTTTGGCGATGCTTATGAGTTTTTGATTTCCAACTATGC
CGCCAATGCCGGAAAATCAGGAGGTGAGTTTTTTACGCCACAACACGTTTCCAAACTCATTGCCCAATTGGCCATGCACA
AGCAGGAAAAAGTAAACAAGATATACGACCCAGCGGCTGGTTCTGGCTCTTTACTGTTGCAAGCCAAAAAACATTTCGAT
AATCATATTATTGAAGAAGGTTTTTATGGGCAGGAAGTGAACCACACCACGTACAACCTGGCCCGTATGAACATGTTTTT
GCACAACATCAATTACGACAAGTTTAATATTGCCCTGGGCAATACTCTCATTGACCCGCACTATGGCGATGAAAAACCTT
TTGATGCCATCGTGTCTAATCCTCCTTACTCCATAAAATGGATTGGTGACGATGACCCCACACTAATTAATGATGACCGT
TTTGCACCTGCCGGTGTATTGGCTCCTAAATCAAAAGCTGATTTTGCATTCGTATTACATGCCCTAAGTTATCTTTCAAG
TAAAGGCAGAGCTGCTATTGTTTGTTTTCCTGGTATTTTTTACCGTGGCGGTGCGGAACAGAAAATCAGAAAATATTTGG
TGGACAATAACTTTGTAGAAACTGTTATTTCTTTAGCACCAAACCTTTTTTTTGGTACTTCTATCGCCGTAAACATTCTG
GTTCTTTCTAAACATAAGCCTGATAATAAAACGCAATTTATAGATGCAAGTGGTGAAGATTTCTTCAAAAAAGCAACCAA
TAACAATGTGCTTACAAACAAACACATTGAAAAGATTATGGAGCTATTCGACAGCAAAGCAGATGTTGACCACATAGCAA
AATCTATAGACAACAACAAAATTGCTGAAAACGATTATAATCTTTCTGTAAGTTCCTATGTTGAAGCTAAAGATAATAGA
GAGGTAATAAATATCGCTAAGTTGAATATGGAGATATCAGAAACTGTGAAAAAGATAAATGCGCTTCGAGCTGATATTGA
TTTGATTGTTAGAGAAATTGAAGGATAA

Protein sequence :
MTSTIQRAELQAKIWKIANDVRGSVDGWDFKQFVLGTLFYRFISENFTNYIEGGDDSVDYASLSDSVITPEIKDDAIKTK
GYFIYPSQLFVNVAEKANTNTNLNTDLKAIFDAIESSANGYASEPDIKGLFADFDTTSTRLGNTVESKNARLAAVLKGVE
ELNFGKFEDNHIDLFGDAYEFLISNYAANAGKSGGEFFTPQHVSKLIAQLAMHKQEKVNKIYDPAAGSGSLLLQAKKHFD
NHIIEEGFYGQEVNHTTYNLARMNMFLHNINYDKFNIALGNTLIDPHYGDEKPFDAIVSNPPYSIKWIGDDDPTLINDDR
FAPAGVLAPKSKADFAFVLHALSYLSSKGRAAIVCFPGIFYRGGAEQKIRKYLVDNNFVETVISLAPNLFFGTSIAVNIL
VLSKHKPDNKTQFIDASGEDFFKKATNNNVLTNKHIEKIMELFDSKADVDHIAKSIDNNKIAENDYNLSVSSYVEAKDNR
EVINIAKLNMEISETVKKINALRADIDLIVREIEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 1e-93 41
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 1e-93 41
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 1e-93 41
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 3e-92 41
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 1e-93 41