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Name : Solca_1609 (Solca_1609) Accession : YP_006255852.1 Strain : Solitalea canadensis DSM 3403 Genome accession: NC_017770 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 1935183 - 1936511 bp Length : 1329 bp Strand : + Note : PFAM: Xylose isomerase-like TIM barrel DNA sequence : ATGTCAATCGTATTAGGAAATAAGGAATATTTCAAAGGGATAAAAGAGATAAAATTTGAAGGTCGTGAATCGGACAATCC ATTGGCGTATCGTTGGTATGACGAGAATCGTGTAATAGCCGGCAAAACCATGAAAGAGCATTTGCGATTTGCTGTGGCTT ATTGGCATTCATTCTGCGGAAGCGGTGCCGATCCATTTGGTGAAGCTACCCATTTGTTTCCATGGAATGAAAAGACGGAT GTTTTAGATCGCGCAAAAGAAAAAATGGATGCGGCTTTTGAATTGATCACCAAGCTTAATCTTCCTTATTACTGTTTTCA TGATGTCGATCTGGTTGATTACGGAAATAACGTGGTGGAGAACGAAAAACGTTTATGTGCAATTACCGAATATGCTAAAA GTAAACAGGCTGCAAGCGGGGTGAAGTTGTTATGGGGCACAGCCAACCTATTTTCACACCGTCGCTATATGAACGGAGCT TCCACAAATCCTGATTTTCATGTGCTGGCACACGGTGCTGCCCAGGTAAAAGCCGCTCTTGATGCTACCATTGAATTGGG TGGTGAAAACTATGTTTTCTGGGGTGGAAGAGAAGGATACATGTCGCTATTAAATACAGACATGAAGCGTGAAAAGGAAC ATCTTGCCGAATTCCTTCGTACAGCTCGTGATTATGCTCGCTTGCAAGGTTTCAAAGGCACTTTCTTTATTGAACCTAAA CCTTGTGAACCTTCAAAGCATCAATATGATTACGATGTAGAAACAGTTATTGGTTTTTTAAGACAGTATGATCTGTTAAA TGACTTTAAGTTAAATATAGAGGTTAACCATGCAACGTTGGCGGGACATACTTTTGAACATGAGTTGCAAGTTGCTGCAG ATGCTGGTTTATTAGGTTCCATCGACGCCAATCGTGGTGATTACCAAAATGGCTGGGATACCGATCAGTTTCCGACTAAT CTGAATGAGCTTACTGAAGCGATGTTAGTGATTTTACAGGCTGGTGGTTTTAAAGGAGGAGGGATCAATTTCGATGCTAA AATTCGCAGGAATTCTACTGATCCTGCCGATTTATTTTATGCACACATTGGAGGTGCCGACAATTTTGCTCGTGCCTTAA TTACCGCTGATAATATTCTTCAACAATCAAACTTCCTGAAATTAAAACAGGAGCGCTATGCCTCATTTGACTCAGGTAAA GGAAAGGAATTTGAACAAGGTAAACTCACTTTGCAGGACTTAAGAGATTTTGCTGTTGCTAATGGTGAGCCTGAAATGAG AAGTGGTAAGCAGGAATATACGGAGAATTTAATCAATAGATTTATATAG Protein sequence : MSIVLGNKEYFKGIKEIKFEGRESDNPLAYRWYDENRVIAGKTMKEHLRFAVAYWHSFCGSGADPFGEATHLFPWNEKTD VLDRAKEKMDAAFELITKLNLPYYCFHDVDLVDYGNNVVENEKRLCAITEYAKSKQAASGVKLLWGTANLFSHRRYMNGA STNPDFHVLAHGAAQVKAALDATIELGGENYVFWGGREGYMSLLNTDMKREKEHLAEFLRTARDYARLQGFKGTFFIEPK PCEPSKHQYDYDVETVIGFLRQYDLLNDFKLNIEVNHATLAGHTFEHELQVAADAGLLGSIDANRGDYQNGWDTDQFPTN LNELTEAMLVILQAGGFKGGGINFDAKIRRNSTDPADLFYAHIGGADNFARALITADNILQQSNFLKLKQERYASFDSGK GKEFEQGKLTLQDLRDFAVANGEPEMRSGKQEYTENLINRFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 9e-99 | 51 |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-98 | 51 |
