Gene Information

Name : SHJG_5142 (SHJG_5142)
Accession : YP_006246283.1
Strain : Streptomyces hygroscopicus 5008
Genome accession: NC_017765
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5891872 - 5893674 bp
Length : 1803 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAACAAGGACGCACGCACGCCTGCCTCCATCCAGGACGAGAAGTCCCCGGAGGCCGGGAAGTCCATCGGCTGGCA
CAAGGCGTATGTCGAGGGCTCGCGCCCCGATCTGCGCGTGCCGGTCCGTCAGGTGCACCTCACCAACGGGCAGTCCGTCA
CGCTGTACGACACGTCAGGCCCGTACACCGATCCACTCGTCGACACGGACGTCCGCCGTGGCCTGCCGCCGCTGCGGGAA
AACTGGATCATCGCCCGCGGCGACACCGAGGAGTACGCGGGCCGTCCGGTCCGTCCCGAGGACGACGGGATCAAGCACAC
CTCGCCGCGCGGCGGGCTGCGGAACCTGGACGCGGTCTTCCCCGGACGCCCGCGTCAGCCGCGGCGGGGCAGCAACGGCC
GGGCGGTGACGCAGCTCGCGTACGCCCGCCGCGGCGAGATCACGCCGGAGATGGAGTTCGTGGCCCTCCGGGAGAACGTT
TCCCCCGAGGTGGTCCGCGAGGAGATCGCGGCGGGCCGGGCCGTGCTGCCGGCCAACATCAACCACCCGGAGATCGAGCC
GATGATCATCGGCAAACGATTCCTGGTGAAGGTGAACGCCAACATCGGCAACTCCGCGGTGACGTCCTCCATCGAGGAGG
AGGTCGAGAAGATGACCTGGGCGACCCGGTGGGGTGCCGACACGGTCATGGACCTGTCCACCGGCCGCAACATCCACACC
ACCCGCGAGTGGGTCCTGCGCAACTCCCCCGTCCCCATCGGCACGGTGCCGCTCTACCAGGCTCTGGAGAAGGTCGACGG
CAAGGCCGAGGAGCTGACCTGGGAGATCTACAAGGACACCGTCATCGAGCAGGCCGAGCAGGGCGTGGACTACATGACGG
TCCACGCGGGCGTCCGGCTGTCGTACGTCCCGCTCACCGCCCACCGCAAGACCGGCATCGTCTCGCGCGGCGGCTCGATC
ATGGCCGCGTGGTGCCTGGCGCACCACAAGGAATCGTTCCTGTACGAGAACTTCGAGGAGCTGTGCGAGATCCTCGCCGC
CTACGACGTCACGTACTCGCTGGGCGACGGTCTGCGGCCGGGTTCGATCGCCGACGCCAACGACGAGGCGCAGTTCGCGG
AGTTGAGGACGCTCGGGGAACTCAACCGGATCGCCAAGCGTTTCAACGTACAGACCATGATCGAGGGCCCGGGACACGTC
CCGATGCACAAGATCAAGGAGAACATCGACCTTCAGCAGGAGATCTGCGATGAAGCTCCGTTCTATACGCTCGGCCCGCT
GACCACGGACGTCGCGCCCGCGTACGACCACATCACCTCCGGCATCGGTGCCGCGATGATCGCCTGGTGGGGCACGGCGA
TGCTCTGCTACGTCACGCCCAAGGAGCACCTCGGCCTGCCCAACCGGGACGACGTCAAGACCGGCGTCATCACCTACAAG
ATCGCCGCACACGCGGCGGACCTCGCCAAGGGGCATCCCGGCGCTCAGGAGTGGGACGACGCACTGTCCGACGCCCGCTT
CGAGTTCCGGTGGGAGGACCAGTTCAACCTCGCGCTGGACCCGGACACGGCACGGGAGTTCCACGACGAGACCCTGCCGG
CCGAGCCCGCCAAGACGGCGCACTTCTGCTCCATGTGCGGCCCGAAGTTCTGCAGCATGAAGATTAGTCAAAGCATCACA
GAGCGGTTCGGTGGTGCGGCGGCTGAGGGCGCGTCGCCTGAGGAGATCGCTGAGGGGATGCTCCAGAAGTCGAAGGAGTT
CGCCGAGTCGGGGAACCGGGTGTACCTGCCGATCGCTGACTGA

Protein sequence :
MANKDARTPASIQDEKSPEAGKSIGWHKAYVEGSRPDLRVPVRQVHLTNGQSVTLYDTSGPYTDPLVDTDVRRGLPPLRE
NWIIARGDTEEYAGRPVRPEDDGIKHTSPRGGLRNLDAVFPGRPRQPRRGSNGRAVTQLAYARRGEITPEMEFVALRENV
SPEVVREEIAAGRAVLPANINHPEIEPMIIGKRFLVKVNANIGNSAVTSSIEEEVEKMTWATRWGADTVMDLSTGRNIHT
TREWVLRNSPVPIGTVPLYQALEKVDGKAEELTWEIYKDTVIEQAEQGVDYMTVHAGVRLSYVPLTAHRKTGIVSRGGSI
MAAWCLAHHKESFLYENFEELCEILAAYDVTYSLGDGLRPGSIADANDEAQFAELRTLGELNRIAKRFNVQTMIEGPGHV
PMHKIKENIDLQQEICDEAPFYTLGPLTTDVAPAYDHITSGIGAAMIAWWGTAMLCYVTPKEHLGLPNRDDVKTGVITYK
IAAHAADLAKGHPGAQEWDDALSDARFEFRWEDQFNLALDPDTAREFHDETLPAEPAKTAHFCSMCGPKFCSMKISQSIT
ERFGGAAAEGASPEEIAEGMLQKSKEFAESGNRVYLPIAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 66
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 66
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 4e-170 59