Gene Information

Name : SHJG_2668 (SHJG_2668)
Accession : YP_006243815.1
Strain : Streptomyces hygroscopicus 5008
Genome accession: NC_017765
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3181643 - 3183373 bp
Length : 1731 bp
Strand : -
Note : -

DNA sequence :
GTGCCCTCGATGCCTGAGATCTCCCGCGCCGCCTACGCCGACCTGTTCGGCCCCACCACCGGCGACCGGATCCGGCTCGC
CGACACCGACCTGCTCGTCGAGATCGAGGAGGACCGCTCCGCCGGCCCCGGCGGCTCCGGGGACGAGGCGGTCTTCGGCG
GCGGCAAGGTCATCCGCGAGTCCATGGGCCAGTCCCGCGCCACCCGCGCCGAGGGCACCCCCGACACCGTGATCACCGGC
GCCGTCGTCGTCGACCACTGGGGCGTCGTCAAGGCCGACGTCGGCATCCGCGACGGACGGATCACCGCCCTCGGCAAGGC
CGGCAACCCGGACACCATGGACGGCGTCCACCCCGACCTGGTCATCGGCCCCGAGACCGAGATCATCGCCGGCAACGGGC
GCATCCTGACCGCCGGCGCCATCGACGCGCACGTCCACTTCATCTGCCCGCAGGTGGCCGACGAGGCGCTGGCCTCCGGC
GTCACCACCCTGGTCGGCGGCGGCACCGGACCCGCCGAGGGCTCCAAGGCCACCACGGTCACCCCCGGGCCCTGGCACCT
GGCCCGGATGCTGGAGGCGATGGAGGCCTACCCCGTCAACGTGGGCTTCCTCGGCAAGGGCAACACCGTCAGCCACGAGG
CGATGCTCTCCCAGATCCGCGGCGGCGCCGTCGGTCTCAAACTGCACGAGGACTGGGGCTCCACGCCCGCCGTCATCGAC
GCGGCGCTCACGGTCGCCGACCGCACCGGCATCCAGGTCGCCATCCACACCGACACCCTGAACGAGGCCGGGTTCGTCGG
CGACACCCTCGCCGCCATCGCGGGCCGGGGCATCCACTCGTACCACACCGAGGGCGCCGGCGGCGGCCACGCCCCGGACA
TCATGACGGTCGTCTCGCAGCCGAACGTCCTGCCCAGCTCCACCAACCCGACCCGGCCCTTCACCGTCAACACGACCGAG
GAACACCTCGACATGCTGATGGTGTGCCACCACCTCAATCCGGCCGTCCCGGAGGACCTGGCGTTCGCCGAGTCCCGGAT
CCGCCCCTCCACCATCGGCGCGGAGGACATCCTCCACGACCTCGGCGCGATCTCGATCATCTCCTCCGACTCCCAGGCGA
TGGGGCGGGTGGGCGAGGTGATCCTGCGCACCTGGCAGACGGCCCACGTCATGAAGCGCCGGCGCGGTGCCCTGCCGGGC
GACGGCCGCGCCGACAACCACCGGGTCCGGCGCTATGTCGCCAAGTACACGATCAACCCCGCGCTCGCCCAGGGCCTCGC
CGCCGAGATCGGCTCCGTCGAGACTGGCAAGCTCGCCGACCTGGTGCTGTGGGAACCCGCGTTCTTCGGGGTCAAGCCGC
TCCTCGTCATCAAGGGCGGGCAGATCGCGTACGCGCAGATGGGCGACGCCAACGCCTCCATCCCCACCCCGCAGCCGATC
CTCCCCCGCCCGATGTACGGCGCCATCGGCCGGGCCCCCGCCGCCAACTCCGTCAACTTCGTCGCGGACCTGGCGATCGA
GGACGGGCTGCCGGAACGGCTGGGACTCGGCAAGCGGTTCGCGGCGATCGAGTCGACGCGTGCGGTCACCAAGGCCGACA
TGCGCGAGAACGACGCCCGGCCGGACGTCCGGATCGACCCCGACAGCTTCGCCGTGCACATCGACGGCGAACTCGTCGAG
GCCACCCCGGCCGCCGAACTGCCCATGGCCCAGCGTTACTTCCTCTTCTAG

Protein sequence :
MPSMPEISRAAYADLFGPTTGDRIRLADTDLLVEIEEDRSAGPGGSGDEAVFGGGKVIRESMGQSRATRAEGTPDTVITG
AVVVDHWGVVKADVGIRDGRITALGKAGNPDTMDGVHPDLVIGPETEIIAGNGRILTAGAIDAHVHFICPQVADEALASG
VTTLVGGGTGPAEGSKATTVTPGPWHLARMLEAMEAYPVNVGFLGKGNTVSHEAMLSQIRGGAVGLKLHEDWGSTPAVID
AALTVADRTGIQVAIHTDTLNEAGFVGDTLAAIAGRGIHSYHTEGAGGGHAPDIMTVVSQPNVLPSSTNPTRPFTVNTTE
EHLDMLMVCHHLNPAVPEDLAFAESRIRPSTIGAEDILHDLGAISIISSDSQAMGRVGEVILRTWQTAHVMKRRRGALPG
DGRADNHRVRRYVAKYTINPALAQGLAAEIGSVETGKLADLVLWEPAFFGVKPLLVIKGGQIAYAQMGDANASIPTPQPI
LPRPMYGAIGRAPAANSVNFVADLAIEDGLPERLGLGKRFAAIESTRAVTKADMRENDARPDVRIDPDSFAVHIDGELVE
ATPAAELPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-172 62
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-172 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-163 59
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 3e-163 59
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 3e-163 59
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 9e-163 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJG_2668 YP_006243815.1 urease subunit alpha VFG0270 Protein 3e-146 56