Gene Information

Name : SHJG_2454 (SHJG_2454)
Accession : YP_006243602.1
Strain : Streptomyces hygroscopicus 5008
Genome accession: NC_017765
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2953499 - 2955016 bp
Length : 1518 bp
Strand : +
Note : -

DNA sequence :
ATGGTGTACGCGCAGCCAGGAACAGACGGCAGCATCGTCAACTTCGCCCGGCGATACGACAACTTCATCGGCGGTGACTG
GGCCGCCCCCGCGGAGGGCCGGTACTTCGAGAACACCACGCCGGTCACCGGAAAGACGTTCTGCGAGGTGGCCCGCTCCT
CCGCCGCCGACATCGACCTCGCCCTGGACGCCGCCCACGCCGCCGCACCCGGGTGGGGCCGCACCTCCACGACGGATCGG
GCGAACATCCTCAACAAGATCGCCGATCGGCTGGAGGCGAACCTGGAGAGGCTCGCGGTCGCGGAGACCTGGGAGAACGG
CAAGCCGGTGCGGGAAACGCTGGCCGCCGACATCCCCCTGGCCATCGACCACTTCCGCTACTTCGCGGGCGTGGTCCGCG
CCCAGGAGGGCAGCATCGCCGAGATCGACGCGGACACGGTCGCCTACCACTTCCACGAGCCGCTGGGCGTGGTCGGCCAG
ATCATTCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAACTGGCGCCCGCGCTGGCCGCCGGCAACTGCGTGGTCAT
CAAGCCCGCCGAACAGACCCCGGTCAGCCTGCTGCTGGTGGTCGAACTCATCGCCGACCTGCTCCCGCCGGGCGTGCTCA
ACGTCGTCAACGGCTTCGGCGTCGAGGCGGGCAAGCCGCTCGCGTCCAGCTCGCGGGTGGCCAAGGTGGCGTTCACCGGT
GAGACCACCACGGGCCGCCTGATCATGCAGTACGCGAGCGAGAACATCATTCCCGTCACGCTGGAGCTGGGCGGCAAGAG
CCCGAACATCTTCCTGCCGGACGTGATGGCCGCCGACGACGACTTCCTGGACAAGGCCGTCGAAGGTTTCGTGATGTTCG
CGCTGAACCAGGGCGAGGTGTGCACCTGCCCCTCGCGCGCCCTGGTCCACTCGTCGATCTACGACGAGTTCATGGCCCGC
TGCGTCGAGCGCACCAAGGCCATCGTCAGCGGCGACCCGCTGGACCCGGCCACCATGATCGGCGCCCAGGCCAGCAACGA
CCAGTACGAGAAGATCCTTTCCTACATCGACATCGGCAAGAAGGAGGGCGCCGAACTCCTCACCGGCGGCAACCCCCGCG
CCGTCGCCGGTCTGGAGGGCGGCTACTACATCGAGCCGACCATCTTCCGCGGCACCAACGACATGCGCATCTTCCAGGAG
GAGATCTTCGGTCCCGTCGTCTCGGTCACCACCTACGACTCGGTCGACGAGGCCCTGAAGATCGCGAACGACACGCTGTA
CGGCCTCGGGGCCGGCGTCTGGACGCGGGACGGCAACACCGCCTACCGCCTCGGCCGGGAGATCAAGGCCGGCCGCGTGT
GGACGAACTGCTACCACGCCTACCCGGCGCACGCCGCCTTCGGCGGCTACAAGAAGTCCGGCATCGGCCGCGAGACCCAC
AAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTCAGCTACTCCGGACAGAAGCTCGGGTTCTTCTGA

Protein sequence :
MVYAQPGTDGSIVNFARRYDNFIGGDWAAPAEGRYFENTTPVTGKTFCEVARSSAADIDLALDAAHAAAPGWGRTSTTDR
ANILNKIADRLEANLERLAVAETWENGKPVRETLAADIPLAIDHFRYFAGVVRAQEGSIAEIDADTVAYHFHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVIKPAEQTPVSLLLVVELIADLLPPGVLNVVNGFGVEAGKPLASSSRVAKVAFTG
ETTTGRLIMQYASENIIPVTLELGGKSPNIFLPDVMAADDDFLDKAVEGFVMFALNQGEVCTCPSRALVHSSIYDEFMAR
CVERTKAIVSGDPLDPATMIGAQASNDQYEKILSYIDIGKKEGAELLTGGNPRAVAGLEGGYYIEPTIFRGTNDMRIFQE
EIFGPVVSVTTYDSVDEALKIANDTLYGLGAGVWTRDGNTAYRLGREIKAGRVWTNCYHAYPAHAAFGGYKKSGIGRETH
KMMLDHYQQTKNLLVSYSGQKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-137 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-145 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-145 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-145 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-145 63
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 2e-91 61
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 1e-91 61
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 7e-92 61
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 5e-91 61
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 5e-91 61
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 2e-91 61
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 2e-91 61
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 2e-91 61
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJG_2454 YP_006243602.1 aldehyde dehydrogenase VFG0082 Protein 3e-137 64