Gene Information

Name : SHJG_1780 (SHJG_1780)
Accession : YP_006242928.1
Strain : Streptomyces hygroscopicus 5008
Genome accession: NC_017765
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2153147 - 2154637 bp
Length : 1491 bp
Strand : -
Note : -

DNA sequence :
ATGACCGTTGCCACCCACGACGAGTGGCTCCGCCGGGCGAAGACGCTCGACCTGCCCCGCACCCATCTCATCGACGGCAC
CGAGGAAGCCGGGGGAGGCAGCACGTTCACCGTGATCTCGCCGCGTGACGGACAGCCGCTGGCGGAAGTCGCCGACGGCG
GCGCCGCCGAGGTCGACGCCGCCGTGGCCGCCGCCCGCCGCGCCTTCGACCGCGGCCCTTGGCCGCGGCTCGCCCCCGCC
GACCGCGGCCGGATCCTGCTGCGCGTCGCCGATCTCCTCGAAGCACACCGGTCCGAGCTGGCGCTCACCGTCAGCCTGGA
GATGGGCAAGCCCATCACCGACGCCCATGACATCGAACTGCGGGCCGTGATCAACACCTTCCGCTGGTACGGCCAGCTCG
CCGACAAGCTCACCGACGAGTCACCGCACACCGCTCCCGACGCCCTCGCCCTCGTCACCCGGGAGCCGGCCGGCGTCGTC
GGCGCGGTCGTGCCCTGGAACTTCCCCCTCACGCTCGCGGGCTGGAAGGTCGCCCCCGCCCTGGCCGCCGGCTGCACGGT
CGTCCTCAAGCCCTCGGAGAACTCGCCCCTGTCGGCACTGCTGCTCGGCCGGCTCGCCCTGGAGGCCGGTCTGCCCCCGG
GCGTGCTCAACGTCGTGGCCGGCGACGGCCCGGTCGCCGGCCGCGCCCTCGGCCTCCACCCCGACGTCGACGTCCTGGCC
TTCACCGGCTCCACCGCCGTCGGCCGCCACTTCCTGCGCTACTCCGCCGACTCCAACCTCAAGCGTGTCTGGCTGGAGCT
GGGCGGCAAGTCCCCCAACATCGTCCTGCCCGACGCCCCCGACCTCGACAAGGCCGCGGCCACCGCCGCCTGGGGCATCT
TCTTCAACCAGGGGGAGATGTGCACCGCGCCCTCCCGGCTGCTGGTCCACTCCTCCATCGCCGAGGACGTCACCGAGGCC
GTCGTACGACGCGCCCGTGAGCTGCGTGTCGGCGACCCCCTCGACCCGGACACCGAGATGGGTGCCCTGGTCGGCGAGCA
GCACCTCGCCCGCGTGCTCGGCCACATCGACGCCGCGCGGCGTGACGGCGCCCGCCTGCGCACCGGCGGCACCCGGATCC
TCACCGAGACCGGCGGTGTCCACCTCGAACCGACCGTCTTCGACCAGGTCGCACCGGGCAGCCGGCTGGCGCGCGAGGAG
GTCTTCGGGCCCGTGCTCTCCGTCCTCACCTTCGACGACGTCGACCAGGCTGTCAGCCTCGCCAACGCCACCGAGTACGG
CCTCGCCGCCGGCCTGTGGACCTCCGACCTGTCCACCGCCCACCGGGTCTCCCGCGCCCTCAAGGCCGGCACCGTCTGGG
TCAACTGCTACGAGGAGGGCGACCTCACCGTGCCCTTCGGCGGCATGAAGCAGTCCGGCAACGGACGGGACAAGTCCGCC
CACGCCCTGGAGAAGTACACCGAACTGAAGACCACCTGGATCCAGCTGTGA

Protein sequence :
MTVATHDEWLRRAKTLDLPRTHLIDGTEEAGGGSTFTVISPRDGQPLAEVADGGAAEVDAAVAAARRAFDRGPWPRLAPA
DRGRILLRVADLLEAHRSELALTVSLEMGKPITDAHDIELRAVINTFRWYGQLADKLTDESPHTAPDALALVTREPAGVV
GAVVPWNFPLTLAGWKVAPALAAGCTVVLKPSENSPLSALLLGRLALEAGLPPGVLNVVAGDGPVAGRALGLHPDVDVLA
FTGSTAVGRHFLRYSADSNLKRVWLELGGKSPNIVLPDAPDLDKAAATAAWGIFFNQGEMCTAPSRLLVHSSIAEDVTEA
VVRRARELRVGDPLDPDTEMGALVGEQHLARVLGHIDAARRDGARLRTGGTRILTETGGVHLEPTVFDQVAPGSRLAREE
VFGPVLSVLTFDDVDQAVSLANATEYGLAAGLWTSDLSTAHRVSRALKAGTVWVNCYEEGDLTVPFGGMKQSGNGRDKSA
HALEKYTELKTTWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-100 57
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-66 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-66 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-66 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-66 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJG_1780 YP_006242928.1 aldehyde dehydrogenase VFG0082 Protein 1e-66 41