Gene Information

Name : SHJG_0117 (SHJG_0117)
Accession : YP_006241271.1
Strain : Streptomyces hygroscopicus 5008
Genome accession: NC_017765
Putative virulence/resistance : Unknown
Product : IS110 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 159484 - 160686 bp
Length : 1203 bp
Strand : +
Note : -

DNA sequence :
GTGACGGACGAAACTGACATCGGCGTCTATCTGGGGCTGGATGTCGGCAAGGGCGAACATCACGCCGCCGCCGTCAATCG
CGCTGGGAAGAAGGTGTTCGACAAGCCGCTGCCCAACAGCGAACCGGAGCTGCGGGAGCTGTTCGACAAGCTCCGGGCCA
AGCACGGGACCGTGCTGATGATCGTCGACCAGCCGGCTTCCATCGGAGCTCTGCCCCTGGCAGTCGCCCGGGATGCGGGC
TGCCAGGTCGCCTACTTGCCCGGGCTGACCATGCGGCGGATTGCCGATCTTTACCCTGGTGAGGCCAAGACCGACGCCCG
TGACGCGTTCGTCCTCGCGGACGCTGCCAGAGCAATGCCCCACACCCTGCGAGCGGTCGATCCCGCCGATGAGACGGTCG
CCGAGCTCGCGATGATCGCAGGCTTCGACGACGACCTGGCGGGCGAGACCACCCGGACCGCCAACCGGCTCCGCGGCCTG
CTCACCCAGATCCATCCGTCGCTGGAACGGGTCCTGGGCCCACGGATCCAGCACCCGGCCGTGCTCAGGCTGCTGGAGCA
GTTCGGTTCCCCGGCCCAGATCCGCAGAGCCGGAAGGCGACGACTGCTCACCCTGATACGGCCGAAGGCACCGCGGATGG
CCGAGCGGCTGGTGGAGGACATCTTCACCGCACTCGACGAACAGACCGTCGTCGTCCCGGGCACCGACGCGGCCGCGCTG
ATCGTCCCCAGCCTCGCCAGCTCCCTCCGGTCCGTCCTTGACCAGCGCAAACTCCTCGCTGCAAGGATCGAAGAACTTCT
GGAGGCCCACCCTCTTTCCCAGGTCCTGATCTCGATGCCAGGCATCGGGGTCAGGACCGCAGCCCGCATCCTCATCGACG
TCGGTGACGGCAGCGGATTCGCCACCGCCGGCCACCTCGCCGCCTACGCCGGCCTGGCACCCGTGACCAGGAACTCCGGC
TCCTCCATCCGCGGCGAACACCCTTCACGACGCGGCAACAAACAGCTCAAACGGGCCTTCTACCTCGCCGCGTTCGCCTC
GCTCTCCCAACCCGAGTCCCGTACCTACTACGACCGAAAACGTCGCGAGGGGAAACACCATGTCGCAGCCCTCGTCGCAC
TCGCCCGACGTCGCATCGACGTCCTCTTCGCGATGCTCCCAGACGGCACCCTCTACCAGTCACCCACCCCGGCTACAGCT
TGA

Protein sequence :
MTDETDIGVYLGLDVGKGEHHAAAVNRAGKKVFDKPLPNSEPELRELFDKLRAKHGTVLMIVDQPASIGALPLAVARDAG
CQVAYLPGLTMRRIADLYPGEAKTDARDAFVLADAARAMPHTLRAVDPADETVAELAMIAGFDDDLAGETTRTANRLRGL
LTQIHPSLERVLGPRIQHPAVLRLLEQFGSPAQIRRAGRRRLLTLIRPKAPRMAERLVEDIFTALDEQTVVVPGTDAAAL
IVPSLASSLRSVLDQRKLLAARIEELLEAHPLSQVLISMPGIGVRTAARILIDVGDGSGFATAGHLAAYAGLAPVTRNSG
SSIRGEHPSRRGNKQLKRAFYLAAFASLSQPESRTYYDRKRREGKHHVAALVALARRRIDVLFAMLPDGTLYQSPTPATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 1e-99 60
CDPW8_2181 YP_005143729.1 transposase-like protein Not tested Not named Protein 2e-53 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJG_0117 YP_006241271.1 IS110 transposase VFG1494 Protein 6e-100 60