|
Name : NT08PM_0916 (NT08PM_0916) Accession : YP_006239801.1 Strain : Pasteurella multocida 3480 Genome accession: NC_017764 Putative virulence/resistance : Virulence Product : protein AfeD Function : - COG functional category : - COG ID : - EC number : - Position : 968435 - 969274 bp Length : 840 bp Strand : + Note : AfeD DNA sequence : ATGGCTGATATCATCAATTGGTTTGTTGAACCTTTCTTGTATCCTTTTATGCAAAATGCCCTCTTCACCGCACTGATCGT TGCGATTATATGTGCGGTGCTTTCCTGCTATTTAGTCTTAAAAGGTTGGTCATTAATGGGCGATGCAATTTCACATGCTG TCTTGCCGGGAATTGTCATTGCATTTATGCTTGGTTTACCACTCACTTTTGGCGCATTTGGTGCAGGCTTATTTTGTGCA TTAAGCGTCGGTTATCTGAAAGAAAATAGCCGTATTAAAGAAGATACCGTAATGGGGATTGTTTTTTCTGGGATGTTTGC CTTTGGTATCGTTTTGTTTACCAAAGTCGAAACAGAACAGCACCTTACTCACATTTTATTTGGTAATCTGTTGGGTGTTA GTCGTGCTGAGTTAGTGCAAACTTTTATTATTGCAACAATCATTTTTGTCATCATGATGCTTAAACGTCGTGACTTCTTG CTTTATTGCTTTGATCAAAGTCATACCCGCGTCGCAGGGCTTTCACCTCGGCTATTACACTATGGCTTACTGGTCTTACT TGCCTTAACCATTATCATGGCGATGCAAGTGGTCGGGGTGATTTTAGTGGTTGCTATGTTAATTTCACCGGGTATCACTG CTTTTTTATTAAGTAAGCGTTTCGACATCATGCTCATCATTGCAATTTGTATGTCTGTCATCACCAGTGTTTTTGGGACG ATTATTAGTTATCATATTGACGCAGCGACAGGACCTTGCATTATTTTATTACAAGCCATGTTCTTTACGCTCGCATTAGG ATATCAAAAAGTAAAATGGCACATACAAAAGCCAATTTAA Protein sequence : MADIINWFVEPFLYPFMQNALFTALIVAIICAVLSCYLVLKGWSLMGDAISHAVLPGIVIAFMLGLPLTFGAFGAGLFCA LSVGYLKENSRIKEDTVMGIVFSGMFAFGIVLFTKVETEQHLTHILFGNLLGVSRAELVQTFIIATIIFVIMMLKRRDFL LYCFDQSHTRVAGLSPRLLHYGLLVLLALTIIMAMQVVGVILVVAMLISPGITAFLLSKRFDIMLIIAICMSVITSVFGT IISYHIDAATGPCIILLQAMFFTLALGYQKVKWHIQKPI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-58 | 52 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-58 | 52 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-58 | 52 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 1e-58 | 52 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 4e-58 | 52 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-46 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-46 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 2e-46 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-46 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-46 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT08PM_0916 | YP_006239801.1 | protein AfeD | BAC0442 | Protein | 1e-79 | 65 |
| NT08PM_0916 | YP_006239801.1 | protein AfeD | BAC0352 | Protein | 9e-59 | 52 |
| NT08PM_0916 | YP_006239801.1 | protein AfeD | BAC0441 | Protein | 4e-41 | 44 |
| NT08PM_0916 | YP_006239801.1 | protein AfeD | BAC0351 | Protein | 1e-46 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT08PM_0916 | YP_006239801.1 | protein AfeD | VFG0528 | Protein | 8e-59 | 52 |
| NT08PM_0916 | YP_006239801.1 | protein AfeD | VFG0527 | Protein | 1e-46 | 41 |
