Gene Information

Name : NT08PM_0914 (NT08PM_0914)
Accession : YP_006239799.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : protein AfeB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 966680 - 967573 bp
Length : 894 bp
Strand : +
Note : AfeB

DNA sequence : 
ATGCCTTCTCCTACCATCGCATCCATTTCAGTCAATGATGTCACTGTTCGTTATAACAATGGACACCTTGCAATTTATGA
TACGACCTTTAACTTAGAAGGCGGTACAACTTGTGCTTTGGTAGGTGTGAATGGCAGTGGAAAATCCACCATTTTCAAAA
GCCTAATGGGATTGGTTAAGCCACAAAAAGGCGAAATTCAACTTTGTGGCTTGCCAATTTCAGCAGCGTTGAAACAAAAT
CTCGTTGCTTATGTGCCTCAATCAGAAGATGTTGACTGGCAGTTTCCCGTTTCCGTCTATGATGTTGTGATGATGGGACG
CTATGGTTATATGAACTTTTTACGTATGCCAAAAGCGATTGACAAACAAAAAGTAAAAGAAGCCATGCAGCGCGTCAATA
TTGAACATCTTGCTGATCGCCAAATTGGTGAGTTATCTGGTGGTCAAAAAAAACGGGTGTTCTTAGCACGTGCCCTTGCC
CAACAAAGTAAAATTATTCTGTTAGATGAACCCTTCACTGGCGTTGATGTAAAAACGGAAAATGCGATTATGGCATTGTT
GGATCAACTACGAAGTGAAGGGCATTTAATTTTAATTTCTACCCATAACTTAGGTACTGTACCTGATTTCTGTGATCAAG
TGGTGATGATTAACCGCACTGTATTAGCGGCAGGTAAAACGGAAACAACCTTTACGCAACGAAATCTCGAATTAGTCTTC
GGTGGGGTGTTACGTCATATTAAATTACTTGGAAAAGATATCCACGATGATGAGGATAGCCGCTCCGTTACCGTATTAAG
TGATGATGAACTTCCTGCTGTCTTCTATGGTGAAACGAAAAATGATCCGCCCGCACCTATTACTAAACATCCTCAACGAA
AAGGCGAACAATAA

Protein sequence : 
MPSPTIASISVNDVTVRYNNGHLAIYDTTFNLEGGTTCALVGVNGSGKSTIFKSLMGLVKPQKGEIQLCGLPISAALKQN
LVAYVPQSEDVDWQFPVSVYDVVMMGRYGYMNFLRMPKAIDKQKVKEAMQRVNIEHLADRQIGELSGGQKKRVFLARALA
QQSKIILLDEPFTGVDVKTENAIMALLDQLRSEGHLILISTHNLGTVPDFCDQVVMINRTVLAAGKTETTFTQRNLELVF
GGVLRHIKLLGKDIHDDEDSRSVTVLSDDELPAVFYGETKNDPPAPITKHPQRKGEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-71 63
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-72 63
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-72 63
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-71 62
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-71 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0914 YP_006239799.1 protein AfeB BAC0440 Protein 8e-99 71
NT08PM_0914 YP_006239799.1 protein AfeB BAC0350 Protein 1e-71 62
NT08PM_0914 YP_006239799.1 protein AfeB BAC0400 Protein 1e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0914 YP_006239799.1 protein AfeB VFG0526 Protein 1e-71 62