Gene Information

Name : NT08PM_0913 (NT08PM_0913)
Accession : YP_006239798.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : protein AfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 965799 - 966680 bp
Length : 882 bp
Strand : +
Note : AfeA

DNA sequence : 
ATGCGTCGCTTAACTGTTATTTTAAGTGCAATTATGTTAGGTATTTTTACATCGCCTGCGTTTGCAAAATTCAAAGTTGT
CACTACGTTTACTGTGATTCAAGATATTGCTCAAAATGTTGCTGGTGATGCAGCCATTGTTGAGTCAATTACCAAACCGG
GTGCGGAAATTCATGATTATGAACCGACACCAAAAGATATCGTCAAAGCACAACATGCCGATCTCGTCTTATGGAATGGC
TTAAATCTTGAGCGTTGGTTTGAAAAATTCTTCGAAAACGTGAAAGATAAACCGGCTGTCGTCGTGACAGAAGGAATCAC
GCCAATTTCAATTTATGAAGGTCCTTACAAAGAAGCACCAAATCCACATGCTTGGATGTCAACATCAAATGCCTTAATTT
ATATTGAAAATATTAAAAATGCATTGGTGAAATATGATCCGAAAAATGCTGACATCTATGTCAAGAATGCAGAAAATTAT
GCAAATAAAATCAAACAATTAGACCAACCATTACGTGAAAAACTTGCCAAAATTCCTGAAGGTCAACGTTGGTTAGTGAC
CAGTGAAGGCGCTTTCAGCTACTTAGCAAAAGATTATGGCTTACAAGAAGCGTATTTATGGCCAATTAATGCGGAAGAAC
AAGGCACACCACAACAAGTGCGTCATGTAATTGAAACAGTACGCAAAAACAATATTCCTGTGGTGTTCAGTGAAAGTACC
ATTTCGGATAAACCTGCAAAACAAGTTGCCAAAGAAACAGGAGCAAAATACGGTGGTGTACTTTATGTAGATTCCTTATC
TACTGCTAAAGGACCAGTACCAACCTATATTGATTTATTAAATACCACTGTTTCCACTATTGTTAAAGGATTTGAAAAAT
AA

Protein sequence : 
MRRLTVILSAIMLGIFTSPAFAKFKVVTTFTVIQDIAQNVAGDAAIVESITKPGAEIHDYEPTPKDIVKAQHADLVLWNG
LNLERWFEKFFENVKDKPAVVVTEGITPISIYEGPYKEAPNPHAWMSTSNALIYIENIKNALVKYDPKNADIYVKNAENY
ANKIKQLDQPLREKLAKIPEGQRWLVTSEGAFSYLAKDYGLQEAYLWPINAEEQGTPQQVRHVIETVRKNNIPVVFSEST
ISDKPAKQVAKETGAKYGGVLYVDSLSTAKGPVPTYIDLLNTTVSTIVKGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-95 65
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-95 65
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-95 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-95 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-95 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0913 YP_006239798.1 protein AfeA BAC0439 Protein 2e-103 77
NT08PM_0913 YP_006239798.1 protein AfeA BAC0349 Protein 1e-95 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0913 YP_006239798.1 protein AfeA VFG0525 Protein 1e-95 65