|
Name : NT08PM_0818 (NT08PM_0818) Accession : YP_006239712.1 Strain : Pasteurella multocida 3480 Genome accession: NC_017764 Putative virulence/resistance : Unknown Product : FhaC protein Function : - COG functional category : - COG ID : - EC number : - Position : 866733 - 868589 bp Length : 1857 bp Strand : - Note : - DNA sequence : ATGCGCTATTCTTCTCTATTCGTTTTCATGTTTTTAGCCGGGAGCGCATTCGCGCAGCCTACCAATTTATCGTCAACGGC ACAAAAAGAATTGGAGCAACTTGACGCACAGCAACAACATCGTCAACAAACATTATTAGAGCAAAAGGATGCCCAATTTT CAGCACAATCGAATGTGCAATTTACAAAACCACCTACATCGTCTTTATCTTTGCCTGAACAAGAGCAGCCTTGTTTTCAG GTAAATAAGATTTTTGTTGTGGACTATCAAACAGAGCATATTCCTCTTTCACAGCAATCTTCACAAAGTACTTTCTTTTC TTCATCCGATTTTTCCTACCGTCTTTCACAATCCACCCAAGTTTTTCAAGCCGACCGCAGTGACTTTTACTGGGCATACC AACAGGCAGCACGCGAGTTGAAATTAACCTTACCACGATGTTTAGGGAGTGAAGGGATAAATGTCTTGATGAAAAAAATG CAGAATTTAATGATTGATAAAGGCTATGTCACGACAAGAGTGGTTGCTGGTGAGCAAGATTTGACGTCAGGGCAATTTAT TTTGACTGTGATACCAGGGCGTTTACGTTACACATTCATAGAAGATAAAAGCAGAGTGAATAAATTCACTCGTTTAACTG CTTGGACAGCGATGGTGCCTCAGCAAGGGGATGTCCTCAATGTCCGTGATATAGAGCAATCACTTGAAAATTTTAAACGG GTAGCAACGGCAGATGCCACGATTAATATTGTACCTGCAGAAGGGGAAGCTCAATTGGGCGAGAGTGATTTAGCCGTGCA ATACGCACAAGCTTTTCCATTTCGTCTTACCTTGGGATTAGATGATGCTGGTTCAACATCCACCGGTCGTTGGCAAGGCT CGGTAACCCTTTCTGTCGATAATATTTTTACGGCGAACGATTTATTTTATACCAGTTTTACACATAGTTTAAAACGTCCT CATTGGGCAGGTGAAGATGATAAAGGACATCGTCAGAGTCGTAATTTGAGTTTTTATTATTCTGTACCTTGGCGTTATTG GCAGTTATCAGCCAGCCATGCAGAAAACGACTATGTACAAGAAGTCGCTGCCGCTTTTGGATCAACAGTGATGTATTCGG GAAAAAGTGAGCAGAGTAAATTAACGCTTTCACGTTTAGTGTTCCGTAATGCACAACATAAAACAACGCTTTCAGGTTCA CTGTGGGCGAGAAAGTCGCATAACTTTATTAATGATGAGGAAGTGACGATCCAACGTAAACGGACAGGCGGTTGGGAGCT GGGTTTACAGCATAAAGCCTATATCGGCAATGCCAGCGTTGAGTTGGGCGCTAACTTTAAGCGGGGCACAGGATTGAATC ATGCTATTCCTTATCCAGATGAGCAGTTTAATGAAGGGACGTCTCGTATGAAAATTATCAGCGCGAATTTAGATGTGGTT AAACCCTTTACGCTTTCTCATCAACAGTTTCTTTTTAATACAAGCTGGCGTGGTCAATGGAATAAAACCCCATTAGTTGC ACAAGACCGATTGAGTATTGGTGGACGTTACACGGTGCGTGGCACAGATGGCGAACTTTCTCTTGCTGCTGAGCGTGGTT GGGTATGGCGTAATGAATTAGGTTGGTGGTTAGGCAACAGTGGACAACAGCTGTATTTTAGTTTGGATAAAGGCAAGGTC AGTGGACCTTCTAGCCAAGATTTATTGGGTACTACATTAGTGGGGAGCAGTTTAGGGTTAAAAGGGGGATGGAAGTGGTT GAGCTATGATGTATTTGTCGGCAAACCATGGCATGTACCAGAAGGTTTTAGAACATCTAAAAATGTAGTTGGATTTCATT TAAGTGCGAGTTTTTAG Protein sequence : MRYSSLFVFMFLAGSAFAQPTNLSSTAQKELEQLDAQQQHRQQTLLEQKDAQFSAQSNVQFTKPPTSSLSLPEQEQPCFQ VNKIFVVDYQTEHIPLSQQSSQSTFFSSSDFSYRLSQSTQVFQADRSDFYWAYQQAARELKLTLPRCLGSEGINVLMKKM QNLMIDKGYVTTRVVAGEQDLTSGQFILTVIPGRLRYTFIEDKSRVNKFTRLTAWTAMVPQQGDVLNVRDIEQSLENFKR VATADATINIVPAEGEAQLGESDLAVQYAQAFPFRLTLGLDDAGSTSTGRWQGSVTLSVDNIFTANDLFYTSFTHSLKRP HWAGEDDKGHRQSRNLSFYYSVPWRYWQLSASHAENDYVQEVAAAFGSTVMYSGKSEQSKLTLSRLVFRNAQHKTTLSGS LWARKSHNFINDEEVTIQRKRTGGWELGLQHKAYIGNASVELGANFKRGTGLNHAIPYPDEQFNEGTSRMKIISANLDVV KPFTLSHQQFLFNTSWRGQWNKTPLVAQDRLSIGGRYTVRGTDGELSLAAERGWVWRNELGWWLGNSGQQLYFSLDKGKV SGPSSQDLLGTTLVGSSLGLKGGWKWLSYDVFVGKPWHVPEGFRTSKNVVGFHLSASF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 5e-71 | 42 |
| NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 6e-78 | 41 |
