Gene Information

Name : NT08PM_0550 (NT08PM_0550)
Accession : YP_006239450.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : protein TTrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 566645 - 569734 bp
Length : 3090 bp
Strand : +
Note : TtrA

DNA sequence :
ATGAATAATCAACGACGTAATTTATTAAAAGGTGGGTTAGCGCTCGGTACAGCAACGGCGTTTGTCACGGGGTATTCGCC
TAAAGTGAAAGAAATTGCCACAGGCTTGCTTGAAGGTACATCGGGCGAACATACACAGGATAAAATCAATGGCAATGCAT
TAACGCCGGAATATCAAGTACAACAAGGCAAATTAATCAGTAATAGTCATCAAGTTGTGTGTAATACCCAATGTATGGGC
TGTTGGACTTTATGTGGTTTACGGGCGCGTGTGGATTTAGCCAAAAATCAAGTATTACGCATTAACGGTAATCCTTATCA
CCCATTATCCGCCGATCAATATCTTGATTTTAACCAACCTATCCAACAGGCAGAGCTAAGTGTGGCGGGAGAAAGTGGCT
TAGCTAATCGTTCCACTGCTTGTGCGCGTGGTGCTGCTTTCCTAGAAGGGATTAATAGCCCTTATCGGTTGACACAACCG
TTAAAACGAGTTGGGAAACGAGGCGAAGGAAAATGGCAAACCATTAGTTTTGAGCAATTGGTGGATGAAGTGGTCAATGG
CGGTGATCTGTTTGGTGAAGGACATGTAGAAGGATTGAAAACAATTCGAGATTTACAAACGCCTGTTGATCAAGAAAATC
CTGAATTTGGTGCGAAAGTCAATCAATTAATGGTGACTTTTGCAGGACCTGAAGGGCGTCAACCTTTATTGAAACGTTTT
GCTAACAACAGTTTTGGTACCATCAATTTTGCTTCACATGGCTCATTTTGTGGTTTGTCTTATCGCGCGGGATCGGGGGC
ATTTATGAATGACCTCGCGAACAACGCGCATGCCAAACCAGATTGGGATCATGCTGAATTTATTTTATTTATGGGAACAT
CACCTGCGCAAGCGGGTAACCCGTTCAAACGCCAAGCGCGTCAACTCGCAAAACAACGCACAGAAGACAATTTTGACTAT
GTTGTGGTGGCACCGCGTTTAGAACTCAGTTCAAGCCGTGCGGTTAATCAGCATCGTTGGGTACCGATTGTCCCGGGTAC
AGATCTCTCTTTGTCTTTAGCCATGTTACGTTGGATCATTGAGAATACACGTTATAACGCGGACTACTTAGCCATACCGA
GTGAAAATGCGATGCAAAGCGCGAACGCGGTGAGTTTTTGTAATGCCACACATTTGTTTATTGCTGATCCACAACATAAA
CGCTATGGACAAGCCTTACGTGTGCAGGATGTGATGGATAGTCCAACACCAGAAAAAACCGAGGATGGTGATATTTTGGT
GAAGGATCAACAAACGGGAGCAATGATCGCCGCAAAAGACAGTCAAAGTGCGGTCCTTTTTGTGGAAGAAATGGTGACAC
TCAAAGAGGGGACCTCTGTTTTAGCGAAATCCGCCTTGCAATTATTTAAAGAATCTTGTTTTGAACACAGTATCGAACAA
TATTCCGCACATTGTGGTGTACCTGTGGCGACGATCATTGAATTGGCAAAAAAATTCACTTCACACGGACATCGTGCCGC
AGTGGTAACCCATGGGGGCACCATGCATGGTACAGGGTTTTATACCGCGTGGGCAATTCTCTTACTCAATGCCATGGTTG
GAAATATGAACAAAAAGGGCGGCATGAGTATGTCTGGCGGAAAGTTTAAAGATTTTGGTGCCGGACCGCGTTATGATTTA
GCCAATTTTCCGAATATGGTCAACCCGAAAGGCACAAACTTAGCACGCAGTAAACGTGCCTATGAGAAATCAAGTGAATT
CAAGCGTAAAGTGGAACAAGGTCTTTCTCCTTACCCTGCGAAAGCCTCATGGTATCCTTTTGTCGGTGGGCAAATGTCAG
AAATGATTACTTCCGCATTACAAGGCTATCCTTACCCACTCAAAGCTTGGATTAGCCATATGAGTAATCCGATTTATGGC
ATGACAGGGATTCATCACATTACGGATGAAAAACTACGTGATCCGCGTATTTTACCGCTCTTTATTGCCGTAGATGCCTT
CATGAATGAAACCACTGCCTTAGCGGATTATATTGTGCCAGATACCCATAATTTTGAGAGTTGGGGATTCAGTACACCAT
GGGCAGGCGTACCGACCAAAACGAGTACCGCGCGTTGGCCAATTATTCAGTCTCACAATGCAAAAACCGCGAGTGGCGAA
ACCATTTGTATGGAAAGTTTTATCATTGCTATCGCCAAAGCGATGGATTTACCTGGATTTGGTGAAAATGCGATTAGTGA
TAAACAAAAAAATAGCTATCCTTTAAACTGTACTGAAGACTATTTTTTACGTGCCGCTGCCAATATTGCGTATGACGGGA
AAGCGCCAGTGAATGATGCGACAGAGGAAGATTTACTGTTAACTGGGGTACAGCGCCTCATGCCAACTTTACAGCGAACT
TTAAAAGCCGAAGAAGTACTGAAAGTGGCGAATGTGTATTGCAAGGGAGGACGTTTTGCACCGTATAAAAGTGCATGGCA
AGAAGATAATATGCAAGCGCGTTGGAAAAATTGTCTGCAAATTTGGAATGAAACGGTCGCTAAAGCGAAACACGCGCAAA
CGGGTCAACATTACCACGGCTGTCCGAAGTATTTTGAACCGCAATTTGCGGATAATTCAACGCTCGAAAGTCATTATCCA
AGCAAAGAATGGCCATTTAAGTTGATTTCATTTAAATCTAATTTAATGAGCAGTATCACCGCACCGTTACTCCGTTTACA
GAGTATTAAACCAGAAGGTATTGTGGCGATGAATCAACAAGATGCGCAGACACAGGGCTTACGACATGGTGATTTGGTCG
AACTCAGTACTCCGGGCGGAAAAGGGTTGGTACAAATTATCGTCATGGAGGGCGTCATCAAGGGGACGATTGCCATTGAA
CATGGTTATGGGCATAAGCAATTAGGTGCTAAGAGCTATGTGATTGATGGAAAAGAGATCCAAGGGGCGCCACAAATTCA
GCGCGGAATAAACATTAATGACTTAGGTTTATTAGATAACACCAAAGAAATTGTTTCCCCTTGGGTGGATTGGGTATGTG
GTTCTGCTGTTCGACAAGGGATTCCCGCGAAATTACAGAAAGTGATTTAG

Protein sequence :
MNNQRRNLLKGGLALGTATAFVTGYSPKVKEIATGLLEGTSGEHTQDKINGNALTPEYQVQQGKLISNSHQVVCNTQCMG
CWTLCGLRARVDLAKNQVLRINGNPYHPLSADQYLDFNQPIQQAELSVAGESGLANRSTACARGAAFLEGINSPYRLTQP
LKRVGKRGEGKWQTISFEQLVDEVVNGGDLFGEGHVEGLKTIRDLQTPVDQENPEFGAKVNQLMVTFAGPEGRQPLLKRF
ANNSFGTINFASHGSFCGLSYRAGSGAFMNDLANNAHAKPDWDHAEFILFMGTSPAQAGNPFKRQARQLAKQRTEDNFDY
VVVAPRLELSSSRAVNQHRWVPIVPGTDLSLSLAMLRWIIENTRYNADYLAIPSENAMQSANAVSFCNATHLFIADPQHK
RYGQALRVQDVMDSPTPEKTEDGDILVKDQQTGAMIAAKDSQSAVLFVEEMVTLKEGTSVLAKSALQLFKESCFEHSIEQ
YSAHCGVPVATIIELAKKFTSHGHRAAVVTHGGTMHGTGFYTAWAILLLNAMVGNMNKKGGMSMSGGKFKDFGAGPRYDL
ANFPNMVNPKGTNLARSKRAYEKSSEFKRKVEQGLSPYPAKASWYPFVGGQMSEMITSALQGYPYPLKAWISHMSNPIYG
MTGIHHITDEKLRDPRILPLFIAVDAFMNETTALADYIVPDTHNFESWGFSTPWAGVPTKTSTARWPIIQSHNAKTASGE
TICMESFIIAIAKAMDLPGFGENAISDKQKNSYPLNCTEDYFLRAAANIAYDGKAPVNDATEEDLLLTGVQRLMPTLQRT
LKAEEVLKVANVYCKGGRFAPYKSAWQEDNMQARWKNCLQIWNETVAKAKHAQTGQHYHGCPKYFEPQFADNSTLESHYP
SKEWPFKLISFKSNLMSSITAPLLRLQSIKPEGIVAMNQQDAQTQGLRHGDLVELSTPGGKGLVQIIVMEGVIKGTIAIE
HGYGHKQLGAKSYVIDGKEIQGAPQIQRGININDLGLLDNTKEIVSPWVDWVCGSAVRQGIPAKLQKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 56
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 56
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 55
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 55
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0550 YP_006239450.1 protein TTrA VFG0484 Protein 0.0 56