Gene Information

Name : NT08PM_0546 (NT08PM_0546)
Accession : YP_006239446.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : TtrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 562434 - 563012 bp
Length : 579 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAATTCATCTGGTTGATGATGACTTAACCGTTTTGGATGCAGCGCGTTTTTTATTAGAACAAGCTGGCTATCAAGT
CCAAACATGGTCAAATAGCCAAGCCTTTGTGAATAAAGCACCGCTGTTTGAACCAGGTGTCGTATTACTGGATATGAAAA
TGCCATTACTTGACGGTCATCAAGTACATCAATTTTTATGCCAACAACAAAGTACGCTTGCAGTAGTGATTATGACAGCA
CATGCCGATGTGCCCATGGCGGTGCAAGAACTCAAACAAGGTGCGGTAGATTTTTTACAAAAACCTGTTCAATTTTCGCA
ATTACAATCTGTATTAAAAACCGCAATACAAACTACGCAATCACGTTACGAACGCTATAAAATTCGACATTGTTATGCCC
AGTTAAGTCGAAAAGAATTGGATATTTTGGCATTGTTAATTCAAGGCTGTATTAATCGGCAAATTGCTGAAGCCTTAAAT
ATTTCTGTGCGTACTGTGGAAGTGCATCGCTCACATATTATGGAAAAAATGCAAGCGCAAACTATTGCTGAATTGATCTA
TAAAACCGCCCAACTCTAA

Protein sequence : 
MLIHLVDDDLTVLDAARFLLEQAGYQVQTWSNSQAFVNKAPLFEPGVVLLDMKMPLLDGHQVHQFLCQQQSTLAVVIMTA
HADVPMAVQELKQGAVDFLQKPVQFSQLQSVLKTAIQTTQSRYERYKIRHCYAQLSRKELDILALLIQGCINRQIAEALN
ISVRTVEVHRSHIMEKMQAQTIAELIYKTAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-42 55
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-42 55
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-42 55
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-42 55
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-42 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0546 YP_006239446.1 TtrR VFG0488 Protein 6e-43 55