Gene Information

Name : NT08PM_0483 (NT08PM_0483)
Accession : YP_006239385.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : protein HexB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 488745 - 489542 bp
Length : 798 bp
Strand : -
Note : HexB

DNA sequence : 
ATGTTATACGATGACCAAACTACACTAAAACACGCTTTTATCATTCAAAATAGAGTGATTGGCGCTCTCCTAATGCGAGA
GATCATCACACGCTATGGCAGAAAGAACCTCGGTTTTTTATGGCTATTTGTTGAACCGCTCTTAATGACAGGGCTAATTG
TGATCTTGTGGAGTACCTTCCGCGCAGATCAATTTTCTAATCTGAATATCATGGCATTCATGATCACAGGCTACCCGTTG
ATGATGATGTGGCGCAATGCATCAAATAGGGCGATTGGTGCGGTTTCTGCCAATAGTACCCTACTCTATCATCGTAATGT
CAGAGTGCTTGACACGTTAATTGCTAGGATGATCTTGGAAATATCCGGTGCAACCATTGCTCAAGTCGTTTTAATGAGTT
TTTGTATTGCACTGGATTGGATACCTATGCCACAGGATATTTTCTATATGCTACTTGCATGGTTTTTGATGGCGATATTT
GCAATCGGATTTGGCTTTATTATTTGTTCTATATCGCATCATATTGAAGTATTCGGTAAATTGTGGGGAATACTAAGCTT
TGCGATGATGCCATTATCTGGCACCTTCTTTTTTGTTTACAATCTCCCCCCACAAGCGAGAGAATATTTACTCTGGATGC
CAATGATTCATGGTTCAGAAATGTTCAGACACGGGTACTTTGGTGATTCTGTTATTACACTAGAAAATCCTTATTTCCTC
ATTTTATGTGACTTAATTTTTCTATTAATTGGGTTATTAATGGTTGCACACTTCAGTAAAGGGATAGAACCTCGATGA

Protein sequence : 
MLYDDQTTLKHAFIIQNRVIGALLMREIITRYGRKNLGFLWLFVEPLLMTGLIVILWSTFRADQFSNLNIMAFMITGYPL
MMMWRNASNRAIGAVSANSTLLYHRNVRVLDTLIARMILEISGATIAQVVLMSFCIALDWIPMPQDIFYMLLAWFLMAIF
AIGFGFIICSISHHIEVFGKLWGILSFAMMPLSGTFFFVYNLPPQAREYLLWMPMIHGSEMFRHGYFGDSVITLENPYFL
ILCDLIFLLIGLLMVAHFSKGIEPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 2e-74 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0483 YP_006239385.1 protein HexB VFG0257 Protein 1e-74 67
NT08PM_0483 YP_006239385.1 protein HexB VFG0685 Protein 1e-76 64
NT08PM_0483 YP_006239385.1 protein HexB VFG0697 Protein 1e-76 64
NT08PM_0483 YP_006239385.1 protein HexB VFG2564 Protein 3e-40 47