Gene Information

Name : NT08PM_0224 (NT08PM_0224)
Accession : YP_006239142.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : VI polysaccharide biosynthesis protein VipA/tviB
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.-
Position : 217325 - 218599 bp
Length : 1275 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATTGAAAAATTAAAAATTGGCATCATTGGTCTTGGTTACGTTGGACTACCTATCGCTGTGGAATTCGGTAAAAA
AGTCCCTACGGTGGGTTTTGATATTAATGAAAAACGTGTCAAATCACTGGCGTCAGGTAAAGATTACACATTAGAAGTGT
CTGAAGAGGAATTACAACATGCCTCCAAATTACGTTATACAAACCAAACCAAAGGGTTAGAAGAATGTAATTTCTTTATT
GTGACAGTTCCCACTCCGATCGATCATTACAAACAACCGGATCTTAAACCCCTGATAAAAGCCTCAGAAACTATCGCAGA
AGTATTGAAAAAGGGGGATGTTGTTGTATATGAATCGACAGTTTATCCAGGTGCGACTGAAGAAATTTGTGTGCCTGTAC
TTGAAAAAATGTCAGGTTTGAAATTTAACCATGACTTCTTTGTCGGTTATAGCCCCGAGCGGATTAATCCTGGTGATAAA
GAACATCGTGTTACGAATATTTTAAAAATTACATCCGGTTCAACTCCACTTGTCGCCAATTATATCGACTTCGTTTATAA
GCTCATTATAAAAGCGGGAACACATCAAGCCCCAAGCATCAAAGTGGCTGAAGCCGCTAAAGTAATTGAAAATACACAAC
GAGATGTCAATATCGCCCTGATTAATGAACTTGCCTTAATCTTCAACAAAATGGGGATTGATACCGAAGATGTGTTAAAC
GCGGCAGGAACGAAATGGAATTTTTTACCTTTTAAGCCCGGTTTAGTAGGCGGGCACTGTATTGGCGTAGATCCTTATTA
TTTAACACACAAAGCACAGTCACTGGGCTTACATCCCGAAATCATTCTTGCTGCACGCCGTTTAAATGACCGTATGGGAG
AATATGTCGCGACACAACTCATTAAAGAAATGGTGAAAAAAGACATTCCCGTAGTCAATTCTAAGATTTTAGTGATGGGC
TTGAGTTTCAAAGAAAATTGTCCAGATATACGTAATACCAAAATTATTGATCTCGTTAATTCATTAAAAGAATACGACAT
TGATATTGATATCTACGATCCTTGGGTAGATAAATACGAAGCAGAAGCAGAATATGGCTTAACACCAATCACAGAGATTC
ATTCACATAACTATGATGCCATTATTATCGCCGTTGCACATCAACAATTTAAGTGTATGACGGAAAAAGATTTTAAAGCA
TTAGGGAAAGAAAATTTTGTCCTTTATGACCTGAAATATGTGTTAGATCAATCTCAAGCCAATATTAGATTATGA

Protein sequence : 
MNIEKLKIGIIGLGYVGLPIAVEFGKKVPTVGFDINEKRVKSLASGKDYTLEVSEEELQHASKLRYTNQTKGLEECNFFI
VTVPTPIDHYKQPDLKPLIKASETIAEVLKKGDVVVYESTVYPGATEEICVPVLEKMSGLKFNHDFFVGYSPERINPGDK
EHRVTNILKITSGSTPLVANYIDFVYKLIIKAGTHQAPSIKVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEDVLN
AAGTKWNFLPFKPGLVGGHCIGVDPYYLTHKAQSLGLHPEIILAARRLNDRMGEYVATQLIKEMVKKDIPVVNSKILVMG
LSFKENCPDIRNTKIIDLVNSLKEYDIDIDIYDPWVDKYEAEAEYGLTPITEIHSHNYDAIIIAVAHQQFKCMTEKDFKA
LGKENFVLYDLKYVLDQSQANIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-132 66
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-132 66
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-103 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_0224 YP_006239142.1 VI polysaccharide biosynthesis protein VipA/tviB VFG0431 Protein 1e-132 66